RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 TTC38Q5R3I4 469 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 LIN9Q5TKA1 542 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 PDXDC1Q6P996 788 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 APBB1IPQ7Z5R6 666 aaPredicted RBP11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 SLC44A3Q8N4M1 653 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 DTWD2Q8NBA8 298 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 KIFAP3Q92845 792 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 NOL7Q9UMY1 257 aaKnown RBP11.12□□□□□ -0.63
SNRPD2-201ENST00000342669 FAM186AA6NE01 2351 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 PTGESO14684 152 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 HNRNPA1P09651 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 SRFP11831 508 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 LAMP2P13473 410 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 TRAPPC10P48553 1259 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 HMGN5P82970 282 aaKnown RBP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 PPM1LQ5SGD2 360 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 ASCL5Q7RTU5 278 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 FRMD5Q7Z6J6 570 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 FBXO18Q8NFZ0 1043 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 LNX1Q8TBB1 728 aaPredicted RBP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 NKD2Q969F2 451 aaPredicted RBP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 BHMT2Q9H2M3 363 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 FBXW11Q9UKB1 542 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 USP20Q9Y2K6 914 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 ZFP37Q9Y6Q3 630 aaPredicted RBP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 MIA3Q5JRA6 1907 aa11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 RIF1Q5UIP0 2472 aaKnown RBP11.11□□□□□ -0.63
SNRPD2-201ENST00000342669 KRBA1A5PL33 1030 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 ANHXE9PGG2 379 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 XYLBO75191 536 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 SEC24BO95487 1268 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 EDN1P05305 212 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 C8AP07357 584 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 HTR4Q13639 388 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 ANGPT1Q15389 498 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 NAB2Q15742 525 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 NT5DC1Q5TFE4 455 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 ATF7IP2Q5U623 682 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 EEF1DP3Q658K8 133 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 ZSCAN31Q96LW9 406 aaPredicted RBP11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 CXCL16Q9H2A7 254 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 LRWD1Q9UFC0 647 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 KIAA1024Q9UPX6 916 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 DMDP11532 3685 aa11.1□□□□□ -0.63
SNRPD2-201ENST00000342669 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 K7ERI5 159 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 CCL16O15467 120 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 B3GAT3O94766 335 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 HOXA9P31269 272 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 YARSP54577 528 aaKnown RBP11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 RAB33AQ14088 237 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 PDIA5Q14554 519 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 ECM1Q16610 540 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 UVSSAQ2YD98 709 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 GLRA4Q5JXX5 417 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 C4orf32Q8N8J7 132 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 GPR152Q8TDT2 470 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 UROC1Q96N76 676 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 TBC1D17Q9HA65 648 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 SH2B1Q9NRF2 756 aaPredicted RBP11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 CDH7Q9ULB5 785 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 DNM3Q9UQ16 869 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 NUMBLQ9Y6R0 609 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 NOTCH4Q99466 2003 aa11.09□□□□□ -0.63
SNRPD2-201ENST00000342669 ADAM12O43184 909 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 POU2F2P09086 479 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 FGFR3P22607 806 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 OR1D2P34982 312 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 CLCNKBP51801 687 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 PEX3P56589 373 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 NTHL1P78549 312 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 PTGDRQ13258 359 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 DMP1Q13316 513 aaPredicted RBP11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 NBR1Q14596 966 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 KRT79Q5XKE5 535 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 MTSS1LQ765P7 747 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 RTL10Q7L3V2 364 aa11.08□□□□□ -0.64
SNRPD2-201ENST00000342669 SLC7A14Q8TBB6 771 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms