RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DNAJC6O75061 913 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 ANPEPP15144 967 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 MAN1A1P33908 653 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 GPSM2P81274 684 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 NET1Q7Z628 596 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-201ENST00000342245 SCYL3Q8IZE3 742 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 POLR3CQ9BUI4 534 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-201ENST00000342245 GPAMQ9HCL2 828 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 SPATA7Q9P0W8 599 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 STRCP1A6NGW2 1772 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 ZMYM2Q9UBW7 1377 aa19.7■□□□□ 0.74
SMPD1-201ENST00000342245 DDB1Q16531 1140 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 SLC44A4Q53GD3 710 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 CCDC62Q6P9F0 684 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 ADGRG6Q86SQ4 1221 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 CCDC65Q8IXS2 484 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 CYP4X1Q8N118 509 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 FAM89AQ96GI7 184 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 SNF8Q96H20 258 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 AGAP3Q96P47 875 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 ZSWIM1Q9BR11 485 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 LRP2BPQ9P2M1 347 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 ANKFY1Q9P2R3 1169 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMPD1-201ENST00000342245 GTPBP10A4D1E9 387 aaKnown RBP19.69■□□□□ 0.74
SMPD1-201ENST00000342245 ANKRD62A6NC57 917 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 CYP7A1P22680 504 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 PLOD1Q02809 727 aaPredicted RBP19.69■□□□□ 0.74
SMPD1-201ENST00000342245 ASPHQ12797 758 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 THOC5Q13769 683 aaKnown RBP19.69■□□□□ 0.74
SMPD1-201ENST00000342245 TRMT5Q32P41 509 aaKnown RBP19.69■□□□□ 0.74
SMPD1-201ENST00000342245 OLFML2BQ68BL8 750 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 RELL1Q8IUW5 271 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 SDR42E1Q8WUS8 393 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 ANKRD2Q9GZV1 360 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 LRRC19Q9H756 370 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 GREM2Q9H772 168 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 EURLQ9NYK6 297 aa19.69■□□□□ 0.74
SMPD1-201ENST00000342245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMPD1-201ENST00000342245 A6NJR5 290 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 ABHD2P08910 425 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 CTSWP56202 376 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 MED21Q13503 144 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 DCTN2Q13561 401 aaKnown RBP19.68■□□□□ 0.74
SMPD1-201ENST00000342245 TMEM119Q4V9L6 283 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 KRT79Q5XKE5 535 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 TSHZ1Q6ZSZ6 1077 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 TOM1L2Q6ZVM7 507 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 DNAAF5Q86Y56 855 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 PASD1Q8IV76 773 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 WNT8AQ9H1J5 351 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 CTTNQ14247 550 aaKnown RBP19.68■□□□□ 0.74
SMPD1-201ENST00000342245 MAP3K21Q5TCX8 1036 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 LNX1Q8TBB1 728 aaPredicted RBP19.68■□□□□ 0.74
SMPD1-201ENST00000342245 ZCRB1Q8TBF4 217 aaKnown RBP19.68■□□□□ 0.74
SMPD1-201ENST00000342245 OXCT2Q9BYC2 517 aaPredicted RBP19.68■□□□□ 0.74
SMPD1-201ENST00000342245 BRD8Q9H0E9 1235 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 KCTD10Q9H3F6 313 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 EMILIN3Q9NT22 766 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 BTBD7Q9P203 1132 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 ALG6Q9Y672 507 aa19.68■□□□□ 0.74
SMPD1-201ENST00000342245 COL1A1P02452 1464 aaPredicted RBP19.68■□□□□ 0.74
SMPD1-201ENST00000342245 hCG_2014768A0A024R1R8 64 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 ANKRD63C9JTQ0 380 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 NDC80O14777 642 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 AP1G1O43747 822 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 CIB2O75838 187 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 RBM26Q5T8P6 1007 aaKnown RBP19.67■□□□□ 0.74
SMPD1-201ENST00000342245 TRABD2AQ86V40 505 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 MAML1Q92585 1016 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 DNAJC19Q96DA6 116 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 CORO1BQ9BR76 489 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 MXD3Q9BW11 206 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 OSBPL8Q9BZF1 889 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 NINJ2Q9NZG7 142 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 TMOD4Q9NZQ9 345 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 FKBP6O75344 327 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 XRCC5P13010 732 aaKnown RBP19.67■□□□□ 0.74
SMPD1-201ENST00000342245 GNA11P29992 359 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 OXCT1P55809 520 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 CDC16Q13042 620 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 EPHA7Q15375 998 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 FAM91A1Q658Y4 838 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 OTOAQ7RTW8 1153 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 TDRPQ86YL5 185 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 BBOF1Q8ND07 529 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 GLIS3Q8NEA6 775 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 PPCSQ9HAB8 311 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 SLCO1B3Q9NPD5 702 aa19.67■□□□□ 0.74
SMPD1-201ENST00000342245 WDR46O15213 610 aaKnown RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 RNASEH1O60930 286 aaKnown RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 ESRRAP11474 423 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 PGM1P36871 562 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 CETN2P41208 172 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 DUS1LQ6P1R4 473 aaKnown RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 HEATR3Q7Z4Q2 680 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 SLC13A5Q86YT5 568 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 SYT2Q8N9I0 419 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 TRAIPQ9BWF2 469 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms