RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 ADAM2Q99965 735 aa22.37■■□□□ 1.17
CLDND1-201ENST00000341181 IBSPP21815 317 aaPredicted RBP22.36■■□□□ 1.17
CLDND1-201ENST00000341181 AKAP5P24588 427 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 GRM5P41594 1212 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 UBXN1Q04323 297 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 PSMD6Q15008 389 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 DBF4BQ8NFT6 615 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 FAM105AQ9NUU6 356 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 RNF19AQ9NV58 838 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 CLCN1P35523 988 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 GCLMP48507 274 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 SLC10A6Q3KNW5 377 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 PLEKHG4Q58EX7 1191 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 DEFB128Q7Z7B8 93 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 CCDC51Q96ER9 411 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 CHST12Q9NRB3 414 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 PCDHB2Q9Y5E7 798 aa22.36■■□□□ 1.17
CLDND1-201ENST00000341181 RECQL4O94761 1208 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 AFPP02771 609 aaKnown RBP22.35■■□□□ 1.17
CLDND1-201ENST00000341181 CLTAP09496 248 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 KLK7P49862 253 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 RTN4RL1Q86UN2 441 aaPredicted RBP22.35■■□□□ 1.17
CLDND1-201ENST00000341181 CRACR2AQ9BSW2 395 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 GOLGA6L6A8MZA4 724 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 ZSCAN20P17040 1043 aaPredicted RBP22.35■■□□□ 1.17
CLDND1-201ENST00000341181 FILIP1LQ4L180 1135 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 EFCAB13Q8IY85 973 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 ZNF516Q92618 1163 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 LPPQ93052 612 aa22.35■■□□□ 1.17
CLDND1-201ENST00000341181 RPF1Q9H9Y2 349 aaKnown RBP22.35■■□□□ 1.17
CLDND1-201ENST00000341181 CITO14578 2027 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 ATF7P17544 494 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-201ENST00000341181 PBX1P40424 430 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 MCCD1P59942 119 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-201ENST00000341181 SCARA3Q6AZY7 606 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 TMC6Q7Z403 805 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 OR5B17Q8NGF7 314 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 TMC2Q8TDI7 906 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 ACAP3Q96P50 834 aa22.34■■□□□ 1.17
CLDND1-201ENST00000341181 TTC26A0AVF1 554 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 LACTBL1A8MY62 500 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 CBFA2T2O43439 604 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 LRRN2O75325 713 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 TPM2P07951 284 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 FMO5P49326 533 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 APBA1Q02410 837 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 FNBP1Q96RU3 617 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 KLK14Q9P0G3 267 aa22.33■■□□□ 1.17
CLDND1-201ENST00000341181 KIAA0355O15063 1070 aa22.33■■□□□ 1.16
CLDND1-201ENST00000341181 CXCL10P02778 98 aa22.33■■□□□ 1.16
CLDND1-201ENST00000341181 NFICP08651 508 aa22.33■■□□□ 1.16
CLDND1-201ENST00000341181 CCDC94Q9BW85 323 aaPredicted RBP22.33■■□□□ 1.16
CLDND1-201ENST00000341181 TMEM117Q9H0C3 514 aa22.33■■□□□ 1.16
CLDND1-201ENST00000341181 TRIP11Q15643 1979 aa22.33■■□□□ 1.16
CLDND1-201ENST00000341181 TIMP1P01033 207 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 TNNI1P19237 187 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 CLDN10P78369 228 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 SYCP1Q15431 976 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 SNX27Q96L92 541 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 CGRRF1Q99675 332 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 MTMR12Q9C0I1 747 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 AFF1P51825 1210 aaKnown RBP22.32■■□□□ 1.16
CLDND1-201ENST00000341181 PPP2R3AQ06190 1150 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 GLRA4Q5JXX5 417 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 APBB1IPQ7Z5R6 666 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-201ENST00000341181 VSTM4Q8IW00 320 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 RNF169Q8NCN4 708 aa22.32■■□□□ 1.16
CLDND1-201ENST00000341181 ZMAT2Q96NC0 199 aaKnown RBP22.32■■□□□ 1.16
CLDND1-201ENST00000341181 RALGAPA2Q2PPJ7 1873 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 A0A0U1RQF3 1178 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 TPM3P06753 285 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 CSF2RAP15509 400 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 RAG1P15918 1043 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 MXI1P50539 228 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 MYL7Q01449 175 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 GOLGA8FQ08AF8 430 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 GOLGA8DPQ0D2H9 430 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 KCNMA1Q12791 1236 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 JADE1Q6IE81 842 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 ELMO3Q96BJ8 720 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 ZFP42Q96MM3 310 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 TRAIPQ9BWF2 469 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 TSPYL2Q9H2G4 693 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-201ENST00000341181 PARP2Q9UGN5 583 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 SIK3Q9Y2K2 1263 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 ZNF500O60304 480 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-201ENST00000341181 FKBP15Q5T1M5 1219 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 TDRD10Q5VZ19 366 aaKnown RBP22.31■■□□□ 1.16
CLDND1-201ENST00000341181 SV2AQ7L0J3 742 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 C7orf61Q8IZ16 206 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 RGS18Q9NS28 235 aa22.31■■□□□ 1.16
CLDND1-201ENST00000341181 EPHB6O15197 1021 aa22.3■■□□□ 1.16
CLDND1-201ENST00000341181 TFAMQ00059 246 aaKnown RBP22.3■■□□□ 1.16
CLDND1-201ENST00000341181 KYAT1Q16773 422 aa22.3■■□□□ 1.16
CLDND1-201ENST00000341181 AGMOQ6ZNB7 445 aa22.3■■□□□ 1.16
CLDND1-201ENST00000341181 LRRC8AQ8IWT6 810 aa22.3■■□□□ 1.16
CLDND1-201ENST00000341181 SEPT8Q92599 483 aa22.3■■□□□ 1.16
CLDND1-201ENST00000341181 ERGIC2Q96RQ1 377 aa22.3■■□□□ 1.16
CLDND1-201ENST00000341181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms