RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 RIMBP2O15034 1052 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 KPNA6O60684 536 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 CRYZL1O95825 349 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 FYNP06241 537 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 RCVRNP35243 200 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 GRIK5Q16478 980 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 GLE1Q53GS7 698 aaKnown RBP18.02■□□□□ 0.47
CDK11B-201ENST00000340677 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 RTKN2Q8IZC4 609 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 DTX3Q8N9I9 347 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 GATA6Q92908 595 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 CENPKQ9BS16 269 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 ZC3H7BQ9UGR2 993 aaKnown RBP18.02■□□□□ 0.47
CDK11B-201ENST00000340677 JAG2Q9Y219 1238 aa18.02■□□□□ 0.47
CDK11B-201ENST00000340677 TMEM114B3SHH9 223 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 WNT7AO00755 349 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 S100BP04271 92 aaPredicted RBP18.01■□□□□ 0.47
CDK11B-201ENST00000340677 MSH2P43246 934 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 SPCS2Q15005 226 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 TTC23LQ6PF05 361 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 OLFM4Q6UX06 510 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 SLC51BQ86UW2 128 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 ARHGAP24Q8N264 748 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 ESR2Q92731 530 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDK11B-201ENST00000340677 GOLGA8MH3BSY2 632 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 H7C1D1 291 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 PTDSS1P48651 473 aaKnown RBP18.01■□□□□ 0.47
CDK11B-201ENST00000340677 RESTQ13127 1097 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 ZNF569Q5MCW4 686 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 STRIP1Q5VSL9 837 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 AIFM2Q9BRQ8 373 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 LZTFL1Q9NQ48 299 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 TSKSQ9UJT2 592 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 RBMX2Q9Y388 322 aaKnown RBP18.01■□□□□ 0.47
CDK11B-201ENST00000340677 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
CDK11B-201ENST00000340677 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 G3V3G9 751 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 H3BQV1 296 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 BACH1O14867 736 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 ICMTO60725 284 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 HSF2BPO75031 334 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 ALAS2P22557 587 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 CALB2P22676 271 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 RTP1P59025 263 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 BPIFB3P59826 476 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 PFKPQ01813 784 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 FAM133BQ5BKY9 247 aaKnown RBP18■□□□□ 0.47
CDK11B-201ENST00000340677 C6orf132Q5T0Z8 1188 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 DCAF8Q5TAQ9 597 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 IFFO2Q5TF58 517 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 PRR23CQ6ZRP0 262 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 RIBC1Q8N443 379 aaPredicted RBP18■□□□□ 0.47
CDK11B-201ENST00000340677 SHCBP1LQ9BZQ2 653 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 ZHX3Q9H4I2 956 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 EHMT1Q9H9B1 1298 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 ZSWIM5Q9P217 1185 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 HDAC3O15379 428 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 TCEA1P23193 301 aaKnown RBP18■□□□□ 0.47
CDK11B-201ENST00000340677 IL32P24001 234 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 NCALDP61601 193 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 PSMD6Q15008 389 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 STILQ15468 1287 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 PDXDC1Q6P996 788 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 HHIPL2Q6UWX4 724 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 TSEN2Q8NCE0 465 aaKnown RBP18■□□□□ 0.47
CDK11B-201ENST00000340677 IL20Q9NYY1 176 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 IL1RAPL1Q9NZN1 696 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 STK38LQ9Y2H1 464 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 FER1L6Q2WGJ9 1857 aa18■□□□□ 0.47
CDK11B-201ENST00000340677 PRSS47A8MTI9 375 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 USP17L21D6R901 530 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 H3BUI4 141 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 HGSO14964 777 aaPredicted RBP17.99■□□□□ 0.47
CDK11B-201ENST00000340677 HOXA2O43364 376 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 CFL1P23528 166 aaKnown RBP17.99■□□□□ 0.47
CDK11B-201ENST00000340677 IFNA8P32881 189 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 SYCP2LQ5T4T6 812 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 CORO6Q6QEF8 472 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 BEND5Q7L4P6 421 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 CHST3Q7LGC8 479 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 IFNLR1Q8IU57 520 aaPredicted RBP17.99■□□□□ 0.47
CDK11B-201ENST00000340677 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.99■□□□□ 0.478e-6■■■■■ 36.8
CDK11B-201ENST00000340677 RNPEPL1Q9HAU8 725 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 KLF18A0A0U1RQI7 1052 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 GNA11P29992 359 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 BTDP43251 543 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 KCTD21Q4G0X4 260 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 ASAP3Q8TDY4 903 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 SH3RF3Q8TEJ3 882 aaPredicted RBP17.99■□□□□ 0.47
CDK11B-201ENST00000340677 SIRT5Q9NXA8 310 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 TRIM33Q9UPN9 1127 aa17.99■□□□□ 0.47
CDK11B-201ENST00000340677 A0A088AWK7 358 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 TRIM64A6NGJ6 449 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 TRIM64BA6NI03 449 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms