RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ATG4AQ8WYN0 398 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
RRP1B-201ENST00000340648 SERPINB12Q96P63 405 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 RMDN3Q96TC7 470 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 ZNF341Q9BYN7 854 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 SLC4A7Q9Y6M7 1214 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 UBE4BO95155 1302 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 F5H423 210 aaPredicted RBP15.72■□□□□ 0.11
RRP1B-201ENST00000340648 TMC3Q7Z5M5 1100 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 TRIML2Q8N7C3 387 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 RUSC1Q9BVN2 902 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 ATP6V0A4Q9HBG4 840 aa15.72■□□□□ 0.11
RRP1B-201ENST00000340648 TBX3O15119 743 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 CCDC22O60826 627 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 KCNA3P22001 575 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 MARK3P27448 753 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 LRRC36Q1X8D7 754 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 ENOSF1Q7L5Y1 443 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 MCPH1Q8NEM0 835 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 PDZD8Q8NEN9 1154 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 SEMA4AQ9H3S1 761 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 ABCD1P33897 745 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 ESRRGP62508 458 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 IFRD2Q12894 506 aaPredicted RBP15.71■□□□□ 0.11
RRP1B-201ENST00000340648 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 TBC1D22BQ9NU19 505 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 PARVAQ9NVD7 372 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 PSMC3IPQ9P2W1 217 aaPredicted RBP15.71■□□□□ 0.11
RRP1B-201ENST00000340648 EPHB6O15197 1021 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 ALDH18A1P54886 795 aaKnown RBP15.71■□□□□ 0.11
RRP1B-201ENST00000340648 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 DYNC1I2Q13409 638 aaKnown RBP15.71■□□□□ 0.11
RRP1B-201ENST00000340648 LVRNQ6Q4G3 990 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 GPD1LQ8N335 351 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 OSBPL8Q9BZF1 889 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 DLGAP2Q9P1A6 1054 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 TCHHQ07283 1943 aa15.71■□□□□ 0.11
RRP1B-201ENST00000340648 PJA2O43164 708 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 SKAP2O75563 359 aaPredicted RBP15.71■□□□□ 0.1
RRP1B-201ENST00000340648 RAD17O75943 681 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 LDHAP00338 332 aaKnown RBP15.71■□□□□ 0.1
RRP1B-201ENST00000340648 TFDP1Q14186 410 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 TFDP2Q14188 446 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 JADE1Q6IE81 842 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 NCAPG2Q86XI2 1143 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 STAMBPL1Q96FJ0 436 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 VPS11Q9H270 941 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.1
RRP1B-201ENST00000340648 MARCOQ9UEW3 520 aaPredicted RBP15.71■□□□□ 0.1
RRP1B-201ENST00000340648 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.1
RRP1B-201ENST00000340648 BAZ2BQ9UIF8 2168 aaKnown RBP15.71■□□□□ 0.1
RRP1B-201ENST00000340648 AKAP3O75969 853 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 PBX1P40424 430 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 CDHR1Q96JP9 859 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 PPP1R16BQ96T49 567 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 MKNK1Q9BUB5 465 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 HAO1Q9UJM8 370 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 EIF3DO15371 548 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■■□ 21.9
RRP1B-201ENST00000340648 SMARCA1P28370 1054 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 PSMC1P62191 440 aaKnown RBP15.7■□□□□ 0.1
RRP1B-201ENST00000340648 HDAC11Q96DB2 347 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 CDC42EP4Q9H3Q1 356 aaKnown RBP15.7■□□□□ 0.1
RRP1B-201ENST00000340648 RARGP13631 454 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 RANBP1P43487 201 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
RRP1B-201ENST00000340648 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 APOL6Q9BWW8 343 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 GABBR1Q9UBS5 961 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 SIK3Q9Y2K2 1263 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 hCG_2014768A0A024R1R8 64 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 FOXP2O15409 715 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 HNRNPCL1O60812 293 aaKnown RBP15.7■□□□□ 0.1
RRP1B-201ENST00000340648 VEGFAP15692 232 aaPredicted RBP15.7■□□□□ 0.1
RRP1B-201ENST00000340648 TRIM72Q6ZMU5 477 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 TEX9Q8N6V9 391 aa15.7■□□□□ 0.1
RRP1B-201ENST00000340648 MYO3BQ8WXR4 1341 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 KRT7P08729 469 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 RALAP11233 206 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 FNTAP49354 379 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 ZNF699Q32M78 642 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 ZNF667Q5HYK9 610 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 PNMA5Q96PV4 448 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 AGPAT3Q9NRZ7 376 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 WNT7AO00755 349 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 TBXAS1P24557 533 aaPredicted RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 SLC27A3Q5K4L6 730 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 RASSF3Q86WH2 238 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 FUKQ8N0W3 1084 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 WWP1Q9H0M0 922 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 HSD3B7Q9H2F3 369 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 RANBP17Q9H2T7 1088 aaKnown RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 L3MBTL1Q9Y468 752 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 TTC4O95801 387 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 NDUFB10O96000 172 aa15.69■□□□□ 0.1
RRP1B-201ENST00000340648 YWHABP31946 246 aaKnown RBP15.69■□□□□ 0.1
RRP1B-201ENST00000340648 PSMC5P62195 406 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms