RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 TRIM28Q13263 835 aaKnown RBP13.36□□□□□ -0.27
XIRP1-201ENST00000340369 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
XIRP1-201ENST00000340369 ANO4Q32M45 955 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
XIRP1-201ENST00000340369 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
XIRP1-201ENST00000340369 LARGE1O95461 756 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 ATP1A3P13637 1013 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 HLA-DPA1P20036 260 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 AGLP35573 1532 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 RESTQ13127 1097 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 NR1H3Q13133 447 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 RASSF3Q86WH2 238 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 SCG3Q8WXD2 468 aaKnown RBP13.36□□□□□ -0.27
XIRP1-201ENST00000340369 KIAA1586Q9HCI6 787 aa13.36□□□□□ -0.27
XIRP1-201ENST00000340369 DIS3Q9Y2L1 958 aaKnown RBP13.36□□□□□ -0.27
XIRP1-201ENST00000340369 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 BTG3Q14201 252 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 C16orf87Q6PH81 154 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 SFR1Q86XK3 245 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 RBM41Q96IZ5 413 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 KPNA7A9QM74 516 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 DAB2P98082 770 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 POU5F1BQ06416 359 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 SNX17Q15036 470 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 E2F4Q16254 413 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 BHMTQ93088 406 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 OCA2Q04671 838 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 PTK2BQ14289 1009 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 C1orf146Q5VVC0 180 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 ULK4Q96C45 1275 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 SRPK1Q96SB4 655 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 FAM95CA0A1B0GW59 222 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 TCF7P36402 384 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 KYAT1Q16773 422 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 GRAMD4Q6IC98 578 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 PBXIP1Q96AQ6 731 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 ZMAT2Q96NC0 199 aaKnown RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 CCDC90BQ9GZT6 254 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 RAB23Q9ULC3 237 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
XIRP1-201ENST00000340369 SYNGAP1Q96PV0 1343 aa13.35□□□□□ -0.27
XIRP1-201ENST00000340369 TBKBP1A7MCY6 615 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 EFNA5P52803 228 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 NLRP11P59045 1033 aaKnown RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 PDCLQ13371 301 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 CCNYL1Q8N7R7 359 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 MLXIPLQ9NP71 852 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 E5RI56 91 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 INHBEP58166 350 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 KRT39Q6A163 491 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 TTC8Q8TAM2 541 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 UBE4BO95155 1302 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 STXBP3O00186 592 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 HOXA2O43364 376 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 KRT38O76015 456 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 TMCC1O94876 653 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 NPTXRO95502 500 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 SP100P23497 879 aaPredicted RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 BLVRAP53004 296 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 RBBP7Q16576 425 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 SLC38A7Q9NVC3 462 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 NOP53Q9NZM5 478 aaKnown RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 AFF4Q9UHB7 1163 aaKnown RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 SNX5Q9Y5X3 404 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 TRIM49BA6NDI0 452 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 SPTLC1O15269 473 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 GCLMP48507 274 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 XKR3Q5GH77 459 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 EMBQ6PCB8 327 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 KCNB1Q14721 858 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 GSPT2Q8IYD1 628 aaKnown RBP13.34□□□□□ -0.27
XIRP1-201ENST00000340369 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 PLA2G12BQ9BX93 195 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 CEP72Q9P209 647 aa13.34□□□□□ -0.27
XIRP1-201ENST00000340369 FAM47DPA6NHR8 397 aa13.33□□□□□ -0.27
XIRP1-201ENST00000340369 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.27
XIRP1-201ENST00000340369 CCDC188H7C350 402 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms