RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 GOLGA8RI6L899 631 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 RALAP11233 206 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 HARSP12081 509 aaKnown RBP17.23■□□□□ 0.35
SCARB1-202ENST00000339570 FMO1Q01740 532 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 PLCB3Q01970 1234 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 CEP55Q53EZ4 464 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 ERP27Q96DN0 273 aa17.23■□□□□ 0.35
SCARB1-202ENST00000339570 PSMD10O75832 226 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 GHRP10912 638 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 CTNNA2P26232 953 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 INTS8Q75QN2 995 aaKnown RBP17.22■□□□□ 0.35
SCARB1-202ENST00000339570 HAUS6Q7Z4H7 955 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 XXYLT1Q8NBI6 393 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 ART4Q93070 314 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 C11orf70Q9BRQ4 267 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 VPS37BQ9H9H4 285 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 LARSQ9P2J5 1176 aaKnown RBP17.22■□□□□ 0.35
SCARB1-202ENST00000339570 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 AFF2P51816 1311 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 EIF3DO15371 548 aaKnown RBP eCLIP17.22■□□□□ 0.351e-7■□□□□ 8.6
SCARB1-202ENST00000339570 RRM1P23921 792 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 RFX8Q6ZV50 586 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 POMGNT1Q8WZA1 660 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
SCARB1-202ENST00000339570 COL14A1Q05707 1796 aaKnown RBP17.22■□□□□ 0.35
SCARB1-202ENST00000339570 TBX3O15119 743 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 CYP11B1P15538 503 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 ITIH4Q14624 930 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 PPP2R5EQ16537 467 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 CENPTQ96BT3 561 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 BICD1Q96G01 975 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 TEKT3Q9BXF9 490 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-202ENST00000339570 YIPF3Q9GZM5 350 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 PCYOX1Q9UHG3 505 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 DCTN4Q9UJW0 460 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 SRRM3A6NNA2 597 aaPredicted RBP17.21■□□□□ 0.35
SCARB1-202ENST00000339570 MSH2P43246 934 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 MGAT5Q09328 741 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 WNT8AQ9H1J5 351 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 SAYSD1Q9NPB0 183 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 NINJ2Q9NZG7 142 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
SCARB1-202ENST00000339570 C15orf41Q9Y2V0 281 aa17.21■□□□□ 0.35
SCARB1-202ENST00000339570 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.34
SCARB1-202ENST00000339570 CFHP08603 1231 aa17.21■□□□□ 0.34
SCARB1-202ENST00000339570 EIF2AK2P19525 551 aaKnown RBP17.21■□□□□ 0.34
SCARB1-202ENST00000339570 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.34
SCARB1-202ENST00000339570 TMEM179Q6ZVK1 233 aa17.21■□□□□ 0.34
SCARB1-202ENST00000339570 ANKMY2Q8IV38 441 aa17.21■□□□□ 0.34
SCARB1-202ENST00000339570 GLIS1Q8NBF1 620 aa17.21■□□□□ 0.34
SCARB1-202ENST00000339570 NOP53Q9NZM5 478 aaKnown RBP17.21■□□□□ 0.34
SCARB1-202ENST00000339570 NYAP2Q9P242 653 aa17.21■□□□□ 0.34
SCARB1-202ENST00000339570 CBX6O95503 412 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 FOXN2P32314 431 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 DYNLT1P63172 113 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 OVGP1Q12889 678 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 FASTKD3Q14CZ7 662 aaKnown RBP17.2■□□□□ 0.34
SCARB1-202ENST00000339570 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 ZNF570Q96NI8 536 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 TRIM6Q9C030 488 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-202ENST00000339570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.341e-7■■■■■ 49.3
SCARB1-202ENST00000339570 PCDHA3Q9Y5H8 950 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 ATP11AP98196 1134 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 IZUMO3Q5VZ72 239 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 RUNDC3BQ96NL0 473 aa17.2■□□□□ 0.34
SCARB1-202ENST00000339570 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 ARL2BPQ9Y2Y0 163 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 CDK5RAP2Q96SN8 1893 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 EXOC1LA0A1B0GW35 172 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 TTC4O95801 387 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 SIX1Q15475 284 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-202ENST00000339570 TAF11Q15544 211 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 SNRNP35Q16560 246 aaKnown RBP17.19■□□□□ 0.34
SCARB1-202ENST00000339570 P3H1Q32P28 736 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 C1orf220Q5T0J3 134 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 C11orf63Q6NUN7 778 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 MKL1Q969V6 931 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 SNF8Q96H20 258 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 TUFT1Q9NNX1 390 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 DMAC2Q9NW81 257 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 NKX1-2Q9UD57 310 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-202ENST00000339570 ZMYND8Q9ULU4 1186 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-202ENST00000339570 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 ANXA13P27216 316 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 NOP14P78316 857 aaKnown RBP17.19■□□□□ 0.34
SCARB1-202ENST00000339570 SEZ6Q53EL9 994 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 MKNK1Q9BUB5 465 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms