RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 RTN2O75298 545 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 CALCAP01258 141 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 MYZAPP0CAP1 466 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 DR1Q01658 176 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 DHX9Q08211 1270 aaKnown RBP17.53■□□□□ 0.4
LITAF-201ENST00000339430 ZNF844Q08AG5 666 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 ST6GALNAC4Q9H4F1 302 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 KMT5AQ9NQR1 393 aa17.53■□□□□ 0.4
LITAF-201ENST00000339430 NOCTQ9UK39 431 aaKnown RBP17.53■□□□□ 0.4
LITAF-201ENST00000339430 GOLGA6L10A0A0M3HER8 536 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 HMGB1P1B2RPK0 211 aaPredicted RBP17.52■□□□□ 0.4
LITAF-201ENST00000339430 TOMM70O94826 608 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 SMTNP53814 917 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 KRT76Q01546 638 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 DMP1Q13316 513 aaPredicted RBP17.52■□□□□ 0.4
LITAF-201ENST00000339430 STXBP2Q15833 593 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 TMC3Q7Z5M5 1100 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 NLRX1Q86UT6 975 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 FAM71AQ8IYT1 594 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 ATP8B4Q8TF62 1192 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 DHX38Q92620 1227 aaKnown RBP17.52■□□□□ 0.4
LITAF-201ENST00000339430 RASSF4Q9H2L5 321 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 GABBR1Q9UBS5 961 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.4
LITAF-201ENST00000339430 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.4
LITAF-201ENST00000339430 TMEM88BA6NKF7 163 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 FAM155AB1AL88 458 aaPredicted RBP17.52■□□□□ 0.39
LITAF-201ENST00000339430 COMTP21964 271 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 GRM1Q13255 1194 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.52■□□□□ 0.39
LITAF-201ENST00000339430 TAS1R2Q8TE23 839 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 TMEM174Q8WUU8 243 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 GPRASP2Q96D09 838 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 CEP170P1Q96L14 293 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 LRRC4CQ9HCJ2 640 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 FAM114A2Q9NRY5 505 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 EXOC7Q9UPT5 735 aa17.52■□□□□ 0.39
LITAF-201ENST00000339430 MYO1FO00160 1098 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 EBAG9O00559 213 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 DLATP10515 647 aaKnown RBP17.51■□□□□ 0.39
LITAF-201ENST00000339430 SFNP31947 248 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 LSP1P33241 339 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 KRT39Q6A163 491 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 SLC39A4Q6P5W5 647 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 LRIG3Q6UXM1 1119 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 UBL4BQ8N7F7 174 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 PARD3BQ8TEW8 1205 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 POMGNT1Q8WZA1 660 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 SEC14L1Q92503 715 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 C18orf8Q96DM3 657 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 NAP1L3Q99457 506 aaPredicted RBP17.51■□□□□ 0.39
LITAF-201ENST00000339430 ANKEF1Q9NU02 776 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 ATP8A1Q9Y2Q0 1164 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 MAPK13O15264 365 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 ZNF862O60290 1169 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 STAM2O75886 525 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 MFAP3P55082 362 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 FMO1Q01740 532 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 C11orf63Q6NUN7 778 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 MAP4K3Q8IVH8 894 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 PI4K2AQ9BTU6 479 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 TIPINQ9BVW5 301 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 RAB17Q9H0T7 212 aa17.51■□□□□ 0.39
LITAF-201ENST00000339430 ADGRA3Q8IWK6 1321 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 HADHBP55084 474 aaKnown RBP17.5■□□□□ 0.39
LITAF-201ENST00000339430 LLGL1Q15334 1064 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 GNPTABQ3T906 1256 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
LITAF-201ENST00000339430 TATDN2Q93075 761 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 VTI1AQ96AJ9 217 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 FMO2Q99518 471 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 ZSWIM1Q9BR11 485 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 ERP44Q9BS26 406 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 NUP85Q9BW27 656 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 CPA4Q9UI42 421 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 USP20Q9Y2K6 914 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 SNX24Q9Y343 169 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 SYNGAP1Q96PV0 1343 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 MAFGO15525 162 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 CYP11B1P15538 503 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 CORO7P57737 925 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 TAF1CQ15572 869 aaPredicted RBP17.5■□□□□ 0.39
LITAF-201ENST00000339430 SWSAP1Q6NVH7 229 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 JAMLQ86YT9 394 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 ZDHHC14Q8IZN3 488 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 HELQQ8TDG4 1101 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 SHC3Q92529 594 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 ZNF653Q96CK0 615 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 FGD4Q96M96 766 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 TRPC6Q9Y210 931 aa17.5■□□□□ 0.39
LITAF-201ENST00000339430 SEC24CP53992 1094 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 SNRPFP62306 86 aaKnown RBP17.49■□□□□ 0.39
LITAF-201ENST00000339430 MTMR3Q13615 1198 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 FAM110CQ1W6H9 321 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 DUPD1Q68J44 220 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 SEPT14Q6ZU15 432 aa17.49■□□□□ 0.39
LITAF-201ENST00000339430 EEPD1Q7L9B9 569 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms