RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 POLIQ9UNA4 740 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 TRIP11Q15643 1979 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PTGESO14684 152 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 N4BP3O15049 544 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 SPTLC1O15269 473 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 USO1O60763 962 aaKnown RBP12.72□□□□□ -0.37
CSMD2-202ENST00000338325 MAGEA9P43362 315 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PFKPQ01813 784 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 ELAVL2Q12926 359 aaKnown RBP12.72□□□□□ -0.37
CSMD2-202ENST00000338325 UBXN2BQ14CS0 331 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 CALCRLQ16602 461 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 SLC44A4Q53GD3 710 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 CDCA2Q69YH5 1023 aaPredicted RBP12.72□□□□□ -0.37
CSMD2-202ENST00000338325 RSPO2Q6UXX9 243 aaPredicted RBP12.72□□□□□ -0.37
CSMD2-202ENST00000338325 ITFG1Q8TB96 612 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 SLC7A14Q8TBB6 771 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 ADAM12O43184 909 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 RECQL4O94761 1208 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 THP07101 528 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 KRT2P35908 639 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 NR5A1Q13285 461 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 NAB2Q15742 525 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 FAM187BQ17R55 369 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 TNFRSF25Q93038 417 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 KXD1Q9BQD3 176 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.38
CSMD2-202ENST00000338325 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 LTB4R2Q9NPC1 389 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 SNTG2Q9NY99 539 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 NCDNQ9UBB6 729 aa12.71□□□□□ -0.38
CSMD2-202ENST00000338325 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 PFKFB2O60825 505 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 CSTF1Q05048 431 aaKnown RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 RAB33AQ14088 237 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 RSPO4Q2I0M5 234 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 PABPC1LQ4VXU2 614 aaKnown RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 RTL10Q7L3V2 364 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 MAEAQ7L5Y9 396 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 NPAS3Q8IXF0 933 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 MCPH1Q8NEM0 835 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 WASF1Q92558 559 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 FZD8Q9H461 694 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 KCNH3Q9ULD8 1083 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 MTF2Q9Y483 593 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-202ENST00000338325 PCDHGA2Q9Y5H1 932 aa12.7□□□□□ -0.38
CSMD2-202ENST00000338325 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 NEMFO60524 1076 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 DTNBO60941 627 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 OR1D2P34982 312 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 TXKP42681 527 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
CSMD2-202ENST00000338325 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
CSMD2-202ENST00000338325 ING5Q8WYH8 240 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 CXCL16Q9H2A7 254 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 DNMT3BQ9UBC3 853 aaKnown RBP12.69□□□□□ -0.38
CSMD2-202ENST00000338325 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 COL4A2P08572 1712 aa12.69□□□□□ -0.38
CSMD2-202ENST00000338325 A0A087WWV3 80 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 TMEM189-UBE2V1I3L0A0 370 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 CTDNEP1O95476 244 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 PRKCBP05771 671 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 CD72P21854 359 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 FGFR3P22607 806 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 TARSP26639 723 aaKnown RBP12.68□□□□□ -0.38
CSMD2-202ENST00000338325 ZBTB41Q5SVQ8 909 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 TPRG1Q6ZUI0 275 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 NOSTRINQ8IVI9 506 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 GPR161Q8N6U8 529 aaKnown RBP12.68□□□□□ -0.38
CSMD2-202ENST00000338325 ZBTB44Q8NCP5 570 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 TPCN1Q9ULQ1 816 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 MRPS23Q9Y3D9 190 aaKnown RBP12.68□□□□□ -0.38
CSMD2-202ENST00000338325 TICRRQ7Z2Z1 1910 aa12.68□□□□□ -0.38
CSMD2-202ENST00000338325 WNT7AO00755 349 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 NCAM2O15394 837 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 ECI2O75521 394 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 ATP2B1P20020 1258 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 SDHBP21912 280 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 MAPK6Q16659 721 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 SECISBP2LQ93073 1101 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 CLDN23Q96B33 292 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms