RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 PRKCZQ05513 592 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 ASTE1Q2TB18 679 aaPredicted RBP11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 ZACNQ401N2 412 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 CRELD2Q6UXH1 353 aaPredicted RBP11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 ZNF571Q7Z3V5 609 aaPredicted RBP11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 TAS1R2Q8TE23 839 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 TRIB2Q92519 343 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 SEMA4DQ92854 862 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 ANKRD36BP1Q96IX9 119 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 MTG1Q9BT17 334 aaPredicted RBP11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 HAPLN2Q9GZV7 340 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 IFT122Q9HBG6 1241 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 GABRQQ9UN88 632 aa11.74□□□□□ -0.53
MS4A4A-201ENST00000337908 A0A087X0T9 212 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 A0A0U1RQJ8 604 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 M0QZ92 97 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 PJA2O43164 708 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 B4GALT5O43286 388 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 FAM228BP0C875 321 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 PROZP22891 400 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 TRPC3Q13507 836 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 NAB2Q15742 525 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 DUOXA2Q1HG44 320 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 DCAF4L1Q3SXM0 396 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 SEZ6Q53EL9 994 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 GNASQ5JWF2 1037 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 ZBTB41Q5SVQ8 909 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 MARCH8Q5T0T0 291 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 LMBRD2Q68DH5 695 aaPredicted RBP11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 KIAA0319LQ8IZA0 1049 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 TRIM58Q8NG06 486 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 ATRIPQ8WXE1 791 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 KAT2BQ92831 832 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 NOX5Q96PH1 765 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 CDT1Q9H211 546 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 TRIM10Q9UDY6 481 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 CPSF3Q9UKF6 684 aaKnown RBP11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 GINS2Q9Y248 185 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 ATP8B3O60423 1300 aa11.73□□□□□ -0.53
MS4A4A-201ENST00000337908 HAS3O00219 553 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 FOXN3O00409 490 aaPredicted RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 ZNF263O14978 683 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 SEPT4O43236 478 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 C4BPAP04003 597 aaKnown RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 CLTAP09496 248 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 H2AFZP0C0S5 128 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 PNMA6AP0CW24 399 aaPredicted RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 KRT5P13647 590 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 TBXAS1P24557 533 aaPredicted RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 TNFSF9P41273 254 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 PDE6CP51160 858 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 GJA9P57773 515 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 OSTNP61366 133 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 POU5F1Q01860 360 aaKnown RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 GCNT1Q02742 428 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 TDRD10Q5VZ19 366 aaKnown RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 ALKBH5Q6P6C2 394 aaKnown RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 C15orf39Q6ZRI6 1047 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 H2AFVQ71UI9 128 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 CATSPER4Q7RTX7 472 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 NME8Q8N427 588 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 RNF10Q8N5U6 811 aaKnown RBP11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 LACRTQ9GZZ8 138 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 PTPRHQ9HD43 1115 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 INTUQ9ULD6 942 aa11.72□□□□□ -0.53
MS4A4A-201ENST00000337908 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 IGHA2P01877 340 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 ARF4P18085 180 aaPredicted RBP11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 MAP2K2P36507 400 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 BPIFB4P59827 614 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 TFAMQ00059 246 aaKnown RBP11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 PURAQ00577 322 aaKnown RBP11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 NCOA4Q13772 614 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 EEF1DP3Q658K8 133 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 RSPH3Q86UC2 560 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 TRPV1Q8NER1 839 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 SHC3Q92529 594 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 ERO1AQ96HE7 468 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 CPB2Q96IY4 423 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 AGPAT1Q99943 283 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 CCDC94Q9BW85 323 aaPredicted RBP11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 UPF3AQ9H1J1 476 aaKnown RBP11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 PDZD7Q9H5P4 517 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 L2HGDHQ9H9P8 463 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 NAGPAQ9UK23 515 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 TFR2Q9UP52 801 aa11.71□□□□□ -0.53
MS4A4A-201ENST00000337908 ANO9A1A5B4 782 aa11.71□□□□□ -0.54
MS4A4A-201ENST00000337908 RCCD1A6NED2 376 aa11.71□□□□□ -0.54
MS4A4A-201ENST00000337908 DYNC1I1O14576 645 aa11.71□□□□□ -0.54
MS4A4A-201ENST00000337908 ABLIM1O14639 778 aa11.71□□□□□ -0.54
MS4A4A-201ENST00000337908 TSPAN1O60635 241 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms