RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SNRNP35Q16560 246 aaKnown RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 DALRD3Q5D0E6 543 aaKnown RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 TRAPPC11Q7Z392 1133 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 OSBPL1AQ9BXW6 950 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 JMJD4Q9H9V9 463 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 KRT82Q9NSB4 513 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 KLHL11Q9NVR0 708 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 NDE1Q9NXR1 346 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 F5H423 210 aaPredicted RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 NVLO15381 856 aaKnown RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 AP3M2P53677 418 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 EIF3EP60228 445 aaKnown RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 P3H1Q32P28 736 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 SGSM3Q96HU1 749 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 DNAJC7Q99615 494 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 LACRTQ9GZZ8 138 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 TRIM33Q9UPN9 1127 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 DLC1Q96QB1 1528 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 AFF2P51816 1311 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 DGAT1O75907 488 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 ACOT2P49753 483 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 LRRC23Q53EV4 343 aaPredicted RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 C1orf228Q6PIY5 440 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 SCG3Q8WXD2 468 aaKnown RBP14.55□□□□□ -0.08
RTN4-202ENST00000337526 C18orf8Q96DM3 657 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 MKNK1Q9BUB5 465 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 SLC24A3Q9HC58 644 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 GTSE1Q9NYZ3 720 aa14.55□□□□□ -0.08
RTN4-202ENST00000337526 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 PAPOLAP51003 745 aaKnown RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 RFX8Q6ZV50 586 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 PRPF31Q8WWY3 499 aaKnown RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 CYFIP2Q96F07 1278 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 TMEM117Q9H0C3 514 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 WWP1Q9H0M0 922 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 DONSONQ9NYP3 566 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 GPR162Q16538 588 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 RABGAP1LQ5R372 815 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 RCOR2Q8IZ40 523 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 C4orf33Q8N1A6 199 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 TTC39CQ8N584 583 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 CCDC124Q96CT7 223 aaKnown RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 NRBF2Q96F24 287 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 ACAD9Q9H845 621 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 KCND2Q9NZV8 630 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 SUCLA2Q9P2R7 463 aaPredicted RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 NAGPAQ9UK23 515 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 RIMS1Q86UR5 1692 aaKnown RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 ATP8B3O60423 1300 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 ASAP2O43150 1006 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 XPAP23025 273 aaPredicted RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 YWHAHQ04917 246 aaPredicted RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 POU5F1BQ06416 359 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 SMAD1Q15797 465 aaKnown RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 CAPRIN2Q6IMN6 1127 aaKnown RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 SLC26A7Q8TE54 656 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 TIPINQ9BVW5 301 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 FSD1LQ9BXM9 530 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 UBN1Q9NPG3 1134 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 NEU2Q9Y3R4 380 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 INO80Q9ULG1 1556 aaPredicted RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 NTSR2O95665 410 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 CDKL3Q8IVW4 592 aaPredicted RBP14.54□□□□□ -0.08
RTN4-202ENST00000337526 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 OSBPL8Q9BZF1 889 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 CARD9Q9H257 536 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 PRR12Q9ULL5 1215 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 CAPN6Q9Y6Q1 641 aa14.54□□□□□ -0.08
RTN4-202ENST00000337526 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 SLC26A4O43511 780 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 ACTR2P61160 394 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 TMEM259Q4ZIN3 620 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 TRPM8Q7Z2W7 1104 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 CAMSAP1Q5T5Y3 1602 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 TMEM120BA0PK00 339 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 FAM47DPA6NHR8 397 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 PGM1P36871 562 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 KIAA1841Q6NSI8 718 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 RNF149Q8NC42 400 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 JPH1Q9HDC5 661 aaPredicted RBP14.53□□□□□ -0.08
RTN4-202ENST00000337526 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
RTN4-202ENST00000337526 LMTK2Q8IWU2 1503 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 CIITAP33076 1130 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 EFNA5P52803 228 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 BIRC2Q13490 618 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 TTI2Q6NXR4 508 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 SENP7Q9BQF6 1050 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 AGXT2Q9BYV1 514 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 GCOM2Q9BZD3 368 aaPredicted RBP14.53□□□□□ -0.08
RTN4-202ENST00000337526 PCDHB2Q9Y5E7 798 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 KIAA0391O15091 583 aaKnown RBP14.53□□□□□ -0.08
RTN4-202ENST00000337526 CORO7P57737 925 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 AP1B1Q10567 949 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 ANO5Q75V66 913 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms