RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 IREB2P48200 963 aaKnown RBP24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 IFT20Q8IY31 132 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 PPP1R13LQ8WUF5 828 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 LMBR1Q8WVP7 490 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 ZNF653Q96CK0 615 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 C17orf75Q9HAS0 396 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 RBAKQ9NYW8 714 aaPredicted RBP24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 MYPNQ86TC9 1320 aa24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 DICER1Q9UPY3 1922 aaKnown RBP24.85■■□□□ 1.57
CLPTM1-201ENST00000337392 MAPK13O15264 365 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 ECHS1P30084 290 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 GJA5P36382 358 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 ARL2P36404 184 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 PSPC1Q8WXF1 523 aaKnown RBP24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 NUP85Q9BW27 656 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 EFCC1Q9HA90 598 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 DAPK3O43293 454 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 GRIN3BO60391 1043 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 PDE6CP51160 858 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 TNNC1P63316 161 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 GPC5P78333 572 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 SYCE1Q8N0S2 351 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 FAM71BQ8TC56 605 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 ZIM3Q96PE6 472 aa24.84■■□□□ 1.57
CLPTM1-201ENST00000337392 EXTL3O43909 919 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 DKC1O60832 514 aaKnown RBP eCLIP24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 STAM2O75886 525 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 GJB6O95452 261 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 RFX1P22670 979 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 EDNRBP24530 442 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 PIK3CAP42336 1068 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 SH2D3CQ8N5H7 860 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 AARSP49588 968 aaKnown RBP eCLIP24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 SLC17A8Q8NDX2 589 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 OR2W6PQ8NHA6 318 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 TMC2Q8TDI7 906 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 TCHPQ9BT92 498 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 VIPAS39Q9H9C1 493 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 TRPC6Q9Y210 931 aa24.83■■□□□ 1.57
CLPTM1-201ENST00000337392 IGKV6D-21A0A0A0MT36 114 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 RTN2O75298 545 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 GARTP22102 1010 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 MOGSQ13724 837 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 HVCN1Q96D96 273 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 IGBP1P78318 339 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 ERO1BQ86YB8 467 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 CEP120Q8N960 986 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 SYT17Q9BSW7 474 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 SNRPFP62306 86 aaKnown RBP24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 TARBP2Q15633 366 aaKnown RBP24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 RASGEF1CQ8N431 466 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 ZNF564Q8TBZ8 553 aaPredicted RBP24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 SPON1Q9HCB6 807 aa24.82■■□□□ 1.56
CLPTM1-201ENST00000337392 B4GALT5O43286 388 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 CST3P01034 146 aaPredicted RBP24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 C4BPAP04003 597 aaKnown RBP24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 CDR2Q01850 454 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 ZNF394Q53GI3 561 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 ANKRD13AQ8IZ07 590 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 RNF149Q8NC42 400 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 LRRC4CQ9HCJ2 640 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 C1orf112Q9NSG2 853 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 EVPLQ92817 2033 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 ZBTB42B2RXF5 422 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 O00370 1275 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 NAMPTP43490 491 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 ZACNQ401N2 412 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 GLE1Q53GS7 698 aaKnown RBP24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 C15orf39Q6ZRI6 1047 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 C18orf8Q96DM3 657 aa24.81■■□□□ 1.56
CLPTM1-201ENST00000337392 NOP56O00567 594 aaKnown RBP24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 PYGMP11217 842 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 RTP1P59025 263 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 TTMPQ5BVD1 217 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 TMEM270Q6UE05 265 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 METTL7BQ6UX53 244 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 RHPN2Q8IUC4 686 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 SEPT1Q8WYJ6 367 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 PIK3R5Q8WYR1 880 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 CYFIP2Q96F07 1278 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 NLRP4Q96MN2 994 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 SPATA33Q96N06 139 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 NUB1Q9Y5A7 615 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 CLCN3P51790 818 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 FOXR1Q6PIV2 292 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 GPR20Q99678 358 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 MED4Q9NPJ6 270 aa24.8■■□□□ 1.56
CLPTM1-201ENST00000337392 HTTP42858 3142 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 SPDYE5A6NIY4 337 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 CAPN2P17655 700 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 EMBQ6PCB8 327 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 NIFKQ9BYG3 293 aaKnown RBP24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 ACBD3Q9H3P7 528 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 AGTPBP1Q9UPW5 1226 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 PAK2Q13177 524 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 AZI2Q9H6S1 392 aa24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 CNOT8Q9UFF9 292 aaKnown RBP24.79■■□□□ 1.56
CLPTM1-201ENST00000337392 A0A0B4J269 797 aa24.78■■□□□ 1.56
CLPTM1-201ENST00000337392 CD58P19256 250 aa24.78■■□□□ 1.56
CLPTM1-201ENST00000337392 RRM1P23921 792 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms