RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 H7C0C1 242 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 OPLAHO14841 1288 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 GJB1P08034 283 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 HNRNPH1P31943 449 aaKnown RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 RPL21P46778 160 aaKnown RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 ATP5OP48047 213 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 PPP2R5CQ13362 524 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 RCN2Q14257 317 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 SETDB1Q15047 1291 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 TKFCQ3LXA3 575 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 MDH1BQ5I0G3 518 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 FMNL3Q8IVF7 1028 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 RNF149Q8NC42 400 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 FAM49AQ9H0Q0 323 aaPredicted RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 PCDHA10Q9Y5I2 948 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 BPTFQ12830 3046 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 ETS1P14921 441 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 YARSP54577 528 aaKnown RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 WDR72Q3MJ13 1102 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 DNAJC24Q6P3W2 148 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 C1orf186Q6ZWK4 172 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 MICALL2Q8IY33 904 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 TRAPPC12Q8WVT3 735 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 FAM149B1Q96BN6 582 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 FAM163AQ96GL9 167 aaPredicted RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 MCEEQ96PE7 176 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 EDEM3Q9BZQ6 932 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 DEFB129Q9H1M3 183 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 PIH1D1Q9NWS0 290 aaKnown RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 PSD3Q9NYI0 1048 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 FBXO40Q9UH90 709 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 AGO2Q9UKV8 859 aaKnown RBP8.77□□□□□ -1.01
HPS4-201ENST00000336873 BCL9LQ86UU0 1499 aa8.77□□□□□ -1.01
HPS4-201ENST00000336873 TMEM120BA0PK00 339 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 BANF1O75531 89 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 PGK2P07205 417 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CYP11B1P15538 503 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 RGS7P49802 495 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ITGA8P53708 1063 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 PSMC5P62195 406 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 SATB1Q01826 763 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CXCL9Q07325 125 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 OVGP1Q12889 678 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 DNAJC3Q13217 504 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 P3H1Q32P28 736 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 RFX6Q8HWS3 928 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 SLC17A8Q8NDX2 589 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ATP8B4Q8TF62 1192 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CHMP6Q96FZ7 201 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 MIS12Q9H081 205 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 COL20A1Q9P218 1284 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 COG5Q9UP83 839 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 TRAF3IP3Q9Y228 551 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 AKT3Q9Y243 479 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 RIPK3Q9Y572 518 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 USP34Q70CQ2 3546 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 WNT10BO00744 389 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ADRB2P07550 413 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 RARAP10276 462 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 PLS3P13797 630 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 HOXD13P35453 343 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CNTN2Q02246 1040 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 MYO1EQ12965 1108 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 AMHR2Q16671 573 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ZNF354CQ86Y25 554 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 SIAH1Q8IUQ4 282 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 AGR3Q8TD06 166 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 TTC17Q96AE7 1141 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 OTUD5Q96G74 571 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ATXN7L3BQ96GX2 97 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 PITPNM3Q9BZ71 974 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 STMN4Q9H169 189 aaPredicted RBP8.76□□□□□ -1.01
HPS4-201ENST00000336873 MARCOQ9UEW3 520 aaPredicted RBP8.76□□□□□ -1.01
HPS4-201ENST00000336873 L3MBTL1Q9Y468 752 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 TELO2Q9Y4R8 837 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 PCDHGC5Q9Y5F6 944 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 SYNGAP1Q96PV0 1343 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CCDC195A0A1B0GUA6 201 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 EDIL3O43854 480 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CAP2P40123 477 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ARSEP51690 589 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CDK17Q00537 523 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 PRKCEQ02156 737 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 MAPK7Q13164 816 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ZCWPW2Q504Y3 356 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 ANGEL2Q5VTE6 544 aaKnown RBP8.76□□□□□ -1.01
HPS4-201ENST00000336873 IZUMO3Q5VZ72 239 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 RSBN1LQ6PCB5 846 aaPredicted RBP8.76□□□□□ -1.01
HPS4-201ENST00000336873 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
HPS4-201ENST00000336873 SLC13A1Q9BZW2 595 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 LRRC4CQ9HCJ2 640 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 CEP350Q5VT06 3117 aa8.76□□□□□ -1.01
HPS4-201ENST00000336873 YDJCA8MPS7 323 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 O00370 1275 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 HLA-DRAP01903 254 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 TMEM253P0C7T8 217 aa8.75□□□□□ -1.01
HPS4-201ENST00000336873 SMARCA1P28370 1054 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms