RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 CALN1Q9BXU9 219 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PPANQ9NQ55 473 aaKnown RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 DPP3Q9NY33 737 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 IPO11Q9UI26 975 aaKnown RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 DSEQ9UL01 958 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 RTN2O75298 545 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 TJP3O95049 919 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 UCHL3P15374 230 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 TRIM31Q9BZY9 425 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 RALAP11233 206 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 ADCY8P40145 1251 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 DGKZQ13574 1117 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 NT5DC4Q86YG4 428 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 CCDC63Q8NA47 563 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 TBC1D31Q96DN5 1066 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 ZMYM2Q9UBW7 1377 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 KRT7P08729 469 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 OR1G1P47890 313 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PSMC1P62191 440 aaKnown RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 NT5DC1Q5TFE4 455 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 CENPPQ6IPU0 288 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 MICALCLQ6ZW33 695 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 NGRNQ9NPE2 291 aaKnown RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 SEPT10Q9P0V9 454 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 CDC23Q9UJX2 597 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 KRT10P13645 584 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 ATF2P15336 505 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 ETNPPLQ8TBG4 499 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 HAS1Q92839 578 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PORCNQ9H237 461 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PIDD1Q9HB75 910 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 TRPV2Q9Y5S1 764 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 A0A087WZ62 844 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 UPP2O95045 317 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 SDC4P31431 198 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 RWDD2BP57060 319 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 ITKQ08881 620 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PTPN21Q16825 1174 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 RBM43Q6ZSC3 357 aaKnown RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 P3H4Q92791 437 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 INPP4AQ96PE3 977 aaPredicted RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 AGPAT1Q99943 283 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 FDXACB1Q9BRP7 624 aaPredicted RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PCDHB2Q9Y5E7 798 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 LAMB1P07942 1786 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 FAM170AA1A519 330 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 EML1O00423 815 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TEX33O43247 280 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 MCF2P10911 925 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 ACADSBP45954 432 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 FLT3LGP49771 235 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 DENND2CQ68D51 928 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 LRRC31Q6UY01 552 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 CCDC60Q8IWA6 550 aaPredicted RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 DCP1BQ8IZD4 617 aaKnown RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF507Q8TCN5 953 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 DNAJB3Q8WWF6 145 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 MAGOHBQ96A72 148 aaKnown RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 COL24A1Q17RW2 1714 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 THP07101 528 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 DUSP28Q4G0W2 176 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 LMBRD2Q68DH5 695 aaPredicted RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 RUFY4Q6ZNE9 571 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 WDR49Q8IV35 697 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 KSR1Q8IVT5 923 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 SYN2Q92777 582 aaPredicted RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 MED15Q96RN5 788 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 ERGIC2Q96RQ1 377 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 DDX50Q9BQ39 737 aaKnown RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 SSU72P8A0A1W2PR75 194 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 EFCAB8A8MWE9 144 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 SGK1O00141 431 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 MOCS3O95396 460 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 FTLP02792 175 aaPredicted RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 NFKBIAP25963 317 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 ATICP31939 592 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 PSMC6P62333 389 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 OSMRQ99650 979 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 H7C4K7 107 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 GRIK1P39086 918 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 SNX17Q15036 470 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 CSPG5O95196 566 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 TBC1D8O95759 1140 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 RAG1P15918 1043 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 ATP11BQ9Y2G3 1177 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 PQBP1O60828 265 aaKnown RBP9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 SCFD1Q8WVM8 642 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
FNDC3B-201ENST00000336824 NUP85Q9BW27 656 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms