RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 LLGL1Q15334 1064 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 ZDHHC24Q6UX98 284 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 B4GALNT4Q76KP1 1039 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 SLC13A5Q86YT5 568 aaPredicted RBP18.98■□□□□ 0.63
LRCH3-201ENST00000334859 CCDC105Q8IYK2 499 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 CDHR1Q96JP9 859 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 LRRC4CQ9HCJ2 640 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PPP1R1BQ9UD71 204 aaPredicted RBP18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PCDHA3Q9Y5H8 950 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PMS2P54278 862 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 EIF3BP55884 814 aaKnown RBP18.98■□□□□ 0.63
LRCH3-201ENST00000334859 RWDD2BP57060 319 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PPP2R2AP63151 447 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 GCNT1Q02742 428 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 CLEC16AQ2KHT3 1053 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 GNPTABQ3T906 1256 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 DENND2CQ68D51 928 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 ACAD10Q6JQN1 1059 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 TAS1R3Q7RTX0 852 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 NLRP14Q86W24 1093 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PPM1EQ8WY54 764 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 CYP39A1Q9NYL5 469 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 GRHL1Q9NZI5 618 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
LRCH3-201ENST00000334859 ANAPC7Q9UJX3 599 aa18.98■□□□□ 0.63
LRCH3-201ENST00000334859 PODXLO00592 558 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 DSG3P32926 999 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 POLGP54098 1239 aaPredicted RBP18.97■□□□□ 0.63
LRCH3-201ENST00000334859 OAZ1P54368 228 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 CYFIP1Q7L576 1253 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 ENOSF1Q7L5Y1 443 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 MYCBPAPQ8TBZ2 947 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 ZNF473Q8WTR7 871 aaKnown RBP18.97■□□□□ 0.63
LRCH3-201ENST00000334859 FNBP1Q96RU3 617 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 TEX13BQ9BXU2 312 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 ACAD9Q9H845 621 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 A1CFQ9NQ94 594 aaKnown RBP18.97■□□□□ 0.63
LRCH3-201ENST00000334859 ARHGAP28Q9P2N2 729 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 SLC12A6Q9UHW9 1150 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 TNNI1P19237 187 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 DRG2P55039 364 aaKnown RBP18.97■□□□□ 0.63
LRCH3-201ENST00000334859 RTP1P59025 263 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 EMC2Q15006 297 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 SPDYCQ5MJ68 293 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 MIS18BP1Q6P0N0 1132 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 HOOK3Q86VS8 718 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 CCT8L2Q96SF2 557 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 PABPC3Q9H361 631 aaKnown RBP18.97■□□□□ 0.63
LRCH3-201ENST00000334859 PDLIM7Q9NR12 457 aa18.97■□□□□ 0.63
LRCH3-201ENST00000334859 MTRF1LQ9UGC7 380 aaKnown RBP18.97■□□□□ 0.63
LRCH3-201ENST00000334859 NFASCO94856 1347 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 RLFQ13129 1914 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 H0YCG3 227 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 CLDN3O15551 220 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 GRIN3BO60391 1043 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 SHBGP04278 402 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 TMOD1P28289 359 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 MAPK4P31152 587 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 GBP1P32455 592 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 PIK3CAP42336 1068 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
LRCH3-201ENST00000334859 MYH9P35579 1960 aaKnown RBP18.95■□□□□ 0.62
LRCH3-201ENST00000334859 EXTL3O43909 919 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 RARAP10276 462 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 COILP38432 576 aaPredicted RBP18.95■□□□□ 0.62
LRCH3-201ENST00000334859 KCNJ1P48048 391 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 STRN3Q13033 797 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 WDR44Q5JSH3 913 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 ABHD15Q6UXT9 468 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 PHLDB2Q86SQ0 1253 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 TADA2BQ86TJ2 420 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 TMEM143Q96AN5 459 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 EPB41L4BQ9H329 900 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 PASKQ96RG2 1323 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 SMIM23A6NLE4 172 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 ZC3H11AO75152 810 aaKnown RBP eCLIP18.95■□□□□ 0.62
LRCH3-201ENST00000334859 KIAA0754O94854 1291 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 FAM107AO95990 144 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 ACOT2P49753 483 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 LIG3P49916 1009 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 TGFB2P61812 414 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 XKR3Q5GH77 459 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 CPA5Q8WXQ8 436 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 ZNF516Q92618 1163 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 PLVAPQ9BX97 442 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 SRCAPQ6ZRS2 3230 aa18.95■□□□□ 0.62
LRCH3-201ENST00000334859 A0A087WUV0 522 aaPredicted RBP18.94■□□□□ 0.62
LRCH3-201ENST00000334859 CAND2O75155 1236 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 ZBTB7AO95365 584 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 NUDT17P0C025 328 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 SUPT20HL2P0C7V6 817 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 BAG6P46379 1132 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 NLRP11P59045 1033 aaKnown RBP18.94■□□□□ 0.62
LRCH3-201ENST00000334859 MKRN4PQ13434 485 aaPredicted RBP18.94■□□□□ 0.62
LRCH3-201ENST00000334859 PPP1R7Q15435 360 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 CYP1B1Q16678 543 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 SUPT20HL1Q3ZLR7 823 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 TRIM7Q9C029 511 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 LRRIQ4A6NIV6 560 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms