RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
C9orf85-201ENST00000334731 AK8Q96MA6 479 aa12.33□□□□□ -0.44
C9orf85-201ENST00000334731 TIPINQ9BVW5 301 aa12.33□□□□□ -0.44
C9orf85-201ENST00000334731 TNFSF13BQ9Y275 285 aa12.33□□□□□ -0.44
C9orf85-201ENST00000334731 NR2E1Q9Y466 385 aa12.33□□□□□ -0.44
C9orf85-201ENST00000334731 CASTOR2A6NHX0 329 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 SLC16A4O15374 487 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 BMP15O95972 392 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 PLS3P13797 630 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 SF3A1Q15459 793 aaKnown RBP12.32□□□□□ -0.44
C9orf85-201ENST00000334731 ARSHQ5FYA8 562 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 APBB1IPQ7Z5R6 666 aaPredicted RBP12.32□□□□□ -0.44
C9orf85-201ENST00000334731 GPR149Q86SP6 731 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 RIN2Q8WYP3 895 aaPredicted RBP12.32□□□□□ -0.44
C9orf85-201ENST00000334731 CDK5RAP3Q96JB5 506 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
C9orf85-201ENST00000334731 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
C9orf85-201ENST00000334731 SFXN1Q9H9B4 322 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 HCN4Q9Y3Q4 1203 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
C9orf85-201ENST00000334731 PHLPP2Q6ZVD8 1323 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 C5orf42Q9H799 3197 aa12.32□□□□□ -0.44
C9orf85-201ENST00000334731 NPHP3-ACAD11A0A0J9YXS1 232 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 VPS37CA5D8V6 355 aaPredicted RBP12.31□□□□□ -0.44
C9orf85-201ENST00000334731 C2CD4DB7Z1M9 353 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 ABLIM1O14639 778 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 SLC26A4O43511 780 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 KIF4AO95239 1232 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 ADH1AP07327 375 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 PDCP20941 246 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 PROZP22891 400 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
C9orf85-201ENST00000334731 UBA7P41226 1012 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 GRM5P41594 1212 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 GRIN1Q05586 938 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 RTP2Q5QGT7 225 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 ALKAL1Q6UXT8 129 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 TRIM67Q6ZTA4 783 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 HFE2Q6ZVN8 426 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 CEP120Q8N960 986 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 TMEM161BQ8NDZ6 487 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 CMASQ8NFW8 434 aaPredicted RBP12.31□□□□□ -0.44
C9orf85-201ENST00000334731 LRRC15Q8TF66 581 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 PPP1R10Q96QC0 940 aaKnown RBP12.31□□□□□ -0.44
C9orf85-201ENST00000334731 CDT1Q9H211 546 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 MAN1C1Q9NR34 630 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
C9orf85-201ENST00000334731 FNIP2Q9P278 1114 aa12.31□□□□□ -0.44
C9orf85-201ENST00000334731 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.44
C9orf85-201ENST00000334731 SMIM28A0A1B0GU29 152 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 BRD1O95696 1058 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 GLUD1P00367 558 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 C1RP00736 705 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 SPATA31D3P0C874 917 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 MAPTP10636 758 aaKnown RBP12.3□□□□□ -0.44
C9orf85-201ENST00000334731 MCF2P10911 925 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
C9orf85-201ENST00000334731 SMTNP53814 917 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 OSTNP61366 133 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 ZNF568Q3ZCX4 644 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 GLRA4Q5JXX5 417 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 LILRA6Q6PI73 481 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 PRSS55Q6UWB4 352 aaPredicted RBP12.3□□□□□ -0.44
C9orf85-201ENST00000334731 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 SPATA31D4Q6ZUB0 917 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 PALB2Q86YC2 1186 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 CALML4Q96GE6 196 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 ZBTB45Q96K62 511 aaPredicted RBP12.3□□□□□ -0.44
C9orf85-201ENST00000334731 TCHPQ9BT92 498 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 TTPALQ9BTX7 342 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
C9orf85-201ENST00000334731 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
C9orf85-201ENST00000334731 CCDC195A0A1B0GUA6 201 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 TMEM221A6NGB7 291 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 M0R296 226 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 TGM5O43548 720 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 MYBP10242 640 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 RPL17P18621 184 aaKnown RBP12.29□□□□□ -0.44
C9orf85-201ENST00000334731 SYT1P21579 422 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 CLCNKBP51801 687 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
C9orf85-201ENST00000334731 STRN3Q13033 797 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
C9orf85-201ENST00000334731 PTPAQ15257 358 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 UPP1Q16831 310 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
C9orf85-201ENST00000334731 BMP8AQ7Z5Y6 402 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms