RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 MAGI3Q5TCQ9 1506 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC35F4A4IF30 521 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 M0QX08 132 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 CNOT3O75175 753 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 IL6P05231 212 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 MSH3P20585 1137 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 HSPA2P54652 639 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 RPL10AP62906 217 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TEX47Q8TBZ9 253 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PRRG3Q9BZD7 231 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 HAUS4Q9H6D7 363 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCMTD2Q9NV79 361 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 STK39Q9UEW8 545 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ELF2Q15723 593 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SWI5Q1ZZU3 235 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKIRIN2Q53H80 203 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ADALQ6DHV7 355 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TPGS1Q6ZTW0 290 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKAP14Q86UN6 197 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC17A8Q8NDX2 589 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 HDAC2Q92769 488 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 RPRD1BQ9NQG5 326 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUP50Q9UKX7 468 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 NOD1Q9Y239 953 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ANKRD36BQ8N2N9 1353 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 FEN1P39748 380 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 EPHB4P54760 987 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 BIKQ13323 160 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZCWPW2Q504Y3 356 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF555Q8NEP9 628 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 APPL2Q8NEU8 664 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ERP44Q9BS26 406 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 INTS9Q9NV88 658 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PPP1R14DQ9NXH3 145 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 STX8Q9UNK0 236 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 POLR3HQ9Y535 204 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPAG17Q6Q759 2223 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUP153P49790 1475 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 C5orf51A6NDU8 294 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 AIPO00170 330 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TEX28O15482 410 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNA5P22460 613 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 RAPSNQ13702 412 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARSHQ5FYA8 562 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATAD3CQ5T2N8 411 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 GPR141Q7Z602 305 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAPKAPK5Q8IW41 473 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM133AQ8N9E0 248 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARHGEF10LQ9HCE6 1279 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZFATQ9P243 1243 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNIP3Q9Y2W7 256 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ABCC5O15440 1437 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM86C2PA6NEL3 165 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 GRXCR2A6NFK2 248 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 EML1O00423 815 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 HSPA12AO43301 675 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PPP6R2O75170 966 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ADRA2BP18089 450 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TNNI1P19237 187 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 AP3S2P59780 193 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 MYBPC1Q00872 1141 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 LRRC74AQ0VAA2 488 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZCCHC12Q6PEW1 402 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKAP1Q92667 903 aaKnown RBP eCLIP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 CUEDC1Q9NWM3 386 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 A0A1B0GVL5 298 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 RASA1P20936 1047 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 TALDO1P37837 337 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ITKQ08881 620 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAPK11Q15759 364 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PHKG1Q16816 387 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 PPM1LQ5SGD2 360 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 HES5Q5TA89 166 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCDC28AQ8IWP9 274 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 DCLK2Q8N568 766 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZBTB8AQ96BR9 441 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 S100A13Q99584 98 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCSER1Q9C0I3 900 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 IL20Q9NYY1 176 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ABCG2Q9UNQ0 655 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 NFIBO00712 420 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 IFIT3O14879 490 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM13AO94988 1023 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 GNAT1P11488 350 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 ST5P78524 1137 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC39A6Q13433 755 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 HMBOX1Q6NT76 420 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 EMBQ6PCB8 327 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 DHX38Q92620 1227 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 LURAP1Q96LR2 239 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLF1Q9BQI6 1058 aa6.38□□□□□ -1.39
CDC42BPA-201ENST00000334218 CENPBD1B2RD01 187 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDPK1O15530 556 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 MFAP3LO75121 409 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 LDHAP00338 332 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZNF12P17014 697 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 PROZP22891 400 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 TYK2P29597 1187 aa6.37□□□□□ -1.39
CDC42BPA-201ENST00000334218 CUL2Q13617 745 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms