RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 INPP5FQ9Y2H2 1132 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 SASH3O75995 380 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 KRT15P19012 456 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 GRB14Q14449 540 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 CCDC197Q8NCU1 140 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 C1orf112Q9NSG2 853 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 DBR1Q9UK59 544 aaKnown RBP12.64□□□□□ -0.39
HDAC6-201ENST00000334136 ATP11BQ9Y2G3 1177 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 LRRC37AA6NMS7 1700 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 RSPH10B2B2RC85 870 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 ZBTB39O15060 712 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 RHOBTB3O94955 611 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 RSPH10BP0C881 870 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 TAF12Q16514 161 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 NPLOC4Q8TAT6 608 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 PLAAQ9Y263 795 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 CABYRO75952 493 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 FARP2O94887 1054 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 GYPCP04921 128 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 INHAP05111 366 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SLC8A1P32418 973 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SESN3P58005 492 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 NCAPHQ15003 741 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 C17orf99Q6UX52 265 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 PPFIBP2Q8ND30 876 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 STMN2Q93045 179 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■■■ 27.3
HDAC6-201ENST00000334136 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SEPT4O43236 478 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 DUSP11O75319 330 aaKnown RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 KIZQ2M2Z5 673 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 BEND6Q5SZJ8 279 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SPATA4Q8NEY3 305 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SENP6Q9GZR1 1112 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 HOMER3Q9NSC5 361 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 PRMT7Q9NVM4 692 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 IGSF9BQ9UPX0 1349 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 KRT14P02533 472 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 VTNP04004 478 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 ICAM3P32942 547 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 EXOC3L4Q17RC7 722 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 TBC1D1Q86TI0 1168 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 ZIC5Q96T25 663 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-201ENST00000334136 AGPAT5Q9NUQ2 364 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 MYH8P13535 1937 aa12.63□□□□□ -0.39
HDAC6-201ENST00000334136 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 AFPP02771 609 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 GUCY2CP25092 1073 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 MXI1P50539 228 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 SLC8A3P57103 927 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 SMC6Q96SB8 1091 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 KIFC3Q9BVG8 833 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 ADAMTS5Q9UNA0 930 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 IGLV3-22A0A075B6J6 115 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 LPXNO60711 386 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 PALMO75781 387 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 KCNA2P16389 499 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 ATP5DP30049 168 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 MYL7Q01449 175 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 BFSP2Q13515 415 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 PPP1R13LQ8WUF5 828 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 OSBPL9Q96SU4 736 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 POLR2AP24928 1970 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 MYBP10242 640 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 YWHAEP62258 255 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 GIT2Q14161 759 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 TARS2Q9BW92 718 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 KLHL14Q9P2G3 628 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 LRRC53A6NM62 1247 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 PGRMC1O00264 195 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 PDXKO00764 312 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 CHUKO15111 745 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 SOX10P56693 466 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 TAF2Q6P1X5 1199 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 TRIM65Q6PJ69 517 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 KCNK18Q7Z418 384 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms