RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SPPL3Q8TCT6 385 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 PABPC5Q96DU9 382 aaKnown RBP10.65□□□□□ -0.7
SYN3-201ENST00000332840 MED15Q96RN5 788 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 ADPGKQ9BRR6 497 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 HSD3B7Q9H2F3 369 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 FZD8Q9H461 694 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 CWH43Q9H720 699 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.7
SYN3-201ENST00000332840 RSAD1Q9HA92 442 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
SYN3-201ENST00000332840 GPRC5CQ9NQ84 441 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 TLR9Q9NR96 1032 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 RNF19AQ9NV58 838 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 PANK4Q9NVE7 773 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 SPG21Q9NZD8 308 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 CTNND2Q9UQB3 1225 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 ZNF318Q5VUA4 2279 aa10.65□□□□□ -0.7
SYN3-201ENST00000332840 TTC3P53804 2025 aa10.65□□□□□ -0.71
SYN3-201ENST00000332840 A0A1B0GUA9 196 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 BICDL2A1A5D9 508 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 H0YCG3 227 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 ACKR2O00590 384 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 N4BP3O15049 544 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 INPPL1O15357 1258 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 KIF20AO95235 890 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 SERPINC1P01008 464 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 PRKCBP05771 671 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 SRGAP2BP0DMP2 458 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 ITGA4P13612 1032 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 ZNF18P17022 549 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 ARF4P18085 180 aaPredicted RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 CCNE1P24864 410 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 GUCY2CP25092 1073 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 ABCD1P33897 745 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 EHHADHQ08426 723 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 STK4Q13043 487 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 COASYQ13057 564 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 PRPF4BQ13523 1007 aaKnown RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 COL19A1Q14993 1142 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 AMHR2Q16671 573 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 ARSHQ5FYA8 562 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 TCEAL5Q5H9L2 206 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 GUF1Q8N442 669 aaKnown RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 MICAL1Q8TDZ2 1067 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 NOC3LQ8WTT2 800 aaKnown RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 POF1BQ8WVV4 589 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 TMEM169Q96HH4 297 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 FAM193BQ96PV7 902 aaPredicted RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 CDCA3Q99618 268 aaPredicted RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 NGRNQ9NPE2 291 aaKnown RBP10.64□□□□□ -0.71
SYN3-201ENST00000332840 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 GIT1Q9Y2X7 761 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 IPPQ9Y573 584 aa10.64□□□□□ -0.71
SYN3-201ENST00000332840 FRMD3A2A2Y4 597 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 ZC3H11AO75152 810 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYN3-201ENST00000332840 OFD1O75665 1012 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 SMTNP53814 917 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 UBASH3AP57075 661 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 SPAG1Q07617 926 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 GIT2Q14161 759 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 DCAF4L1Q3SXM0 396 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 LEXMQ3ZCV2 418 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 HERC4Q5GLZ8 1057 aaPredicted RBP10.63□□□□□ -0.71
SYN3-201ENST00000332840 FAM26FQ5R3K3 315 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 UBXN11Q5T124 520 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 RINT1Q6NUQ1 792 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 AGMOQ6ZNB7 445 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 ANKRD20A12PQ8NF67 263 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 LPPQ93052 612 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 TMEM175Q9BSA9 504 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 XPO4Q9C0E2 1151 aaKnown RBP10.63□□□□□ -0.71
SYN3-201ENST00000332840 SLC39A2Q9NP94 309 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 SAMSN1Q9NSI8 373 aaKnown RBP10.63□□□□□ -0.71
SYN3-201ENST00000332840 TBC1D13Q9NVG8 400 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 LARSQ9P2J5 1176 aaKnown RBP10.63□□□□□ -0.71
SYN3-201ENST00000332840 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 MAPK8IP1Q9UQF2 711 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 INPP5FQ9Y2H2 1132 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 PCDHB13Q9Y5F0 798 aa10.63□□□□□ -0.71
SYN3-201ENST00000332840 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
SYN3-201ENST00000332840 RALGAPA2Q2PPJ7 1873 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.62□□□□□ -0.71
SYN3-201ENST00000332840 CCDC169A6NNP5 214 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 K7ERI5 159 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 HIP1RO75146 1068 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 ATP1A3P13637 1013 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 GAP43P17677 238 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 KCNA5P22460 613 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 BCAR1P56945 870 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 CDKAL1Q5VV42 579 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 CENPPQ6IPU0 288 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 FOXR2Q6PJQ5 311 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 LRRC55Q6ZSA7 311 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 C1orf186Q6ZWK4 172 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 SLC39A11Q8N1S5 342 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 EFHBQ8N7U6 833 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 SPC24Q8NBT2 197 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 KIAA0895Q8NCT3 520 aa10.62□□□□□ -0.71
SYN3-201ENST00000332840 SMG8Q8ND04 991 aaKnown RBP10.62□□□□□ -0.71
SYN3-201ENST00000332840 SPIRE2Q8WWL2 714 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms