RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 C7orf43Q8WVR3 580 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 DENND2DQ9H6A0 471 aaPredicted RBP19.35■□□□□ 0.69
PKP3-201ENST00000331563 FAM198AQ9UFP1 575 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 RBM47A0AV96 593 aaKnown RBP19.35■□□□□ 0.69
PKP3-201ENST00000331563 E9PMD0 336 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 SMAPO00193 183 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 GDF11O95390 407 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 ANXA13P27216 316 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
PKP3-201ENST00000331563 RRP1BQ14684 758 aaKnown RBP19.35■□□□□ 0.69
PKP3-201ENST00000331563 HHIPL2Q6UWX4 724 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 TRMT10CQ7L0Y3 403 aaKnown RBP19.35■□□□□ 0.69
PKP3-201ENST00000331563 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 UBL4BQ8N7F7 174 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 ARHGEF26Q96DR7 871 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 KCTD10Q9H3F6 313 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 DCLRE1BQ9H816 532 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 PRDM16Q9HAZ2 1276 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 ZNF277Q9NRM2 450 aaPredicted RBP19.35■□□□□ 0.69
PKP3-201ENST00000331563 SYNGAP1Q96PV0 1343 aa19.35■□□□□ 0.69
PKP3-201ENST00000331563 A0A1W2PRG0 241 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 VCAM1P19320 739 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 LMNB1P20700 586 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 GSTT1P30711 240 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 DNAJC3Q13217 504 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 STYK1Q6J9G0 422 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 FBXO41Q8TF61 875 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 PRMT6Q96LA8 375 aaPredicted RBP19.34■□□□□ 0.69
PKP3-201ENST00000331563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.34■□□□□ 0.69
PKP3-201ENST00000331563 LRCH1Q9Y2L9 728 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 PASKQ96RG2 1323 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 ATP9AO75110 1047 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 TMEM253P0C7T8 217 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 VHLP40337 213 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 SERPINB4P48594 390 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 CACNA2D1P54289 1103 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 IL9RQ01113 521 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 WASHC2DQ5SRD0 308 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 SEL1L2Q5TEA6 688 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 STRIP1Q5VSL9 837 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 ENDOVQ8N8Q3 282 aaKnown RBP19.34■□□□□ 0.69
PKP3-201ENST00000331563 MKL1Q969V6 931 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 THAP2Q9H0W7 228 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 KIAA1024Q9UPX6 916 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 CHKBQ9Y259 395 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 USH1CQ9Y6N9 552 aa19.34■□□□□ 0.69
PKP3-201ENST00000331563 TAC1P20366 129 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 ACVR2BQ13705 512 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 CTTNQ14247 550 aaKnown RBP19.33■□□□□ 0.69
PKP3-201ENST00000331563 RASIP1Q5U651 963 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 KRT35Q92764 455 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 INPP5DQ92835 1189 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 METTL5Q9NRN9 209 aaKnown RBP19.33■□□□□ 0.69
PKP3-201ENST00000331563 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.69
PKP3-201ENST00000331563 SUGT1Q9Y2Z0 365 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 ALG6Q9Y672 507 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 CLRN2A0PK11 232 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 TTLL1O95922 423 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 TNNI2P48788 182 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 INHBCP55103 352 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 SNAP25P60880 206 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 PPATQ06203 517 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 ZRSR2Q15696 482 aaKnown RBP19.33■□□□□ 0.69
PKP3-201ENST00000331563 KYNUQ16719 465 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 TMEM119Q4V9L6 283 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 FAM136AQ96C01 138 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 ZDHHC15Q96MV8 337 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 VCX3BQ9H321 246 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 VCX3AQ9NNX9 186 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 PCYOX1Q9UHG3 505 aa19.33■□□□□ 0.69
PKP3-201ENST00000331563 LMNAP02545 664 aaKnown RBP19.33■□□□□ 0.68
PKP3-201ENST00000331563 HSPA6P17066 643 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 FOXN2P32314 431 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 MARCKSL1P49006 195 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 SNX30Q5VWJ9 437 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 PPP1R21Q6ZMI0 780 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 FRMD5Q7Z6J6 570 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 ART4Q93070 314 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 ZNF333Q96JL9 665 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 ASIC3Q9UHC3 531 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 MTUS1Q9ULD2 1270 aa19.33■□□□□ 0.68
PKP3-201ENST00000331563 THAP12O43422 761 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 TNFAIP3P21580 790 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 Q4G0T1 1027 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 SCG3Q8WXD2 468 aaKnown RBP19.32■□□□□ 0.68
PKP3-201ENST00000331563 POP1Q99575 1024 aaKnown RBP19.32■□□□□ 0.68
PKP3-201ENST00000331563 GMEB1Q9Y692 573 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 DCTN3O75935 186 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 HLA-DOAP06340 250 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 PLA2G4BP0C869 781 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 MPP3Q13368 585 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 RCN1Q15293 331 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 EDRF1Q3B7T1 1238 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 ARMCX6Q7L4S7 300 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 CCNJLQ8IV13 435 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 PHTF1Q9UMS5 762 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 NENFQ9UMX5 172 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 PCDHB13Q9Y5F0 798 aa19.32■□□□□ 0.68
PKP3-201ENST00000331563 TAL1P17542 331 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms