RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-201ENST00000331163 KCNA10Q16322 511 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 RIN2Q8WYP3 895 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-201ENST00000331163 SENP6Q9GZR1 1112 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-201ENST00000331163 DNAJC25-GNG10A0A024R161 153 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 HLA-DRAP01903 254 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
PDGFB-201ENST00000331163 ZNF296Q8WUU4 475 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-201ENST00000331163 TAF4BQ92750 862 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 LPPQ93052 612 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
PDGFB-201ENST00000331163 TRMT13Q9NUP7 481 aaKnown RBP17.07■□□□□ 0.32
PDGFB-201ENST00000331163 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 GPR25O00155 361 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 EVI5O60447 810 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 MAFO75444 373 aaPredicted RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 ICAM3P32942 547 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 GPC3P51654 580 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 EHHADHQ08426 723 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 TTC19Q6DKK2 380 aaPredicted RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 SLFN12LQ6IEE8 588 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 RSPH3Q86UC2 560 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 PACSIN1Q9BY11 444 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 FAM204AQ9H8W3 233 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 NCK2O43639 380 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 ITGB3P05106 788 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 VSNL1P62760 191 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 RNASELQ05823 741 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 NCOA4Q13772 614 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 ALKBH5Q6P6C2 394 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 PPTC7Q8NI37 304 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 DHX33Q9H6R0 707 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 MORF4L1Q9UBU8 362 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 CAPN11Q9UMQ6 739 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 CTGFP29279 349 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 EFNA5P52803 228 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 PTK2Q05397 1052 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 ZNF699Q32M78 642 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 RAB20Q9NX57 234 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 TIMM13Q9Y5L4 95 aaPredicted RBP17.06■□□□□ 0.32
PDGFB-201ENST00000331163 SNX9Q9Y5X1 595 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 ADGRG1Q9Y653 693 aa17.06■□□□□ 0.32
PDGFB-201ENST00000331163 CTAGE9A4FU28 777 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 MTHFD1LQ6UB35 978 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 RNF180Q86T96 592 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 SECISBP2LQ93073 1101 aaKnown RBP17.05■□□□□ 0.32
PDGFB-201ENST00000331163 STARD7Q9NQZ5 370 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 MAGEB2O15479 319 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 TACC1O75410 805 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 TOM1L1O75674 476 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 STAG3L1P0CL83 205 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 CCL23P55773 120 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 MYL6P60660 151 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 SLC20A2Q08357 652 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 RUFY4Q6ZNE9 571 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 APTXQ7Z2E3 356 aaKnown RBP17.05■□□□□ 0.32
PDGFB-201ENST00000331163 ACAP3Q96P50 834 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 LACRTQ9GZZ8 138 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
PDGFB-201ENST00000331163 CTAGE15A4D2H0 777 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 CTAGE8P0CG41 777 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 EDNRBP24530 442 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 ALCAMQ13740 583 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 MESDQ14696 234 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 CTAGE6Q86UF2 777 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 CTAGE4Q8IX94 777 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 OR6B3Q8NGW1 331 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 ALS2CR12Q96Q35 445 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 HMX1Q9NP08 348 aaPredicted RBP17.05■□□□□ 0.32
PDGFB-201ENST00000331163 JRKLQ9Y4A0 524 aa17.05■□□□□ 0.32
PDGFB-201ENST00000331163 A0A087X0T9 212 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 IVLP07476 585 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 FAM228BP0C875 321 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 GTF2BQ00403 316 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 MAP4K3Q8IVH8 894 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 GSPT2Q8IYD1 628 aaKnown RBP17.04■□□□□ 0.32
PDGFB-201ENST00000331163 SLC20A1Q8WUM9 679 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 CPA5Q8WXQ8 436 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 SMARCAL1Q9NZC9 954 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 LRRIQ3A6PVS8 624 aaPredicted RBP17.04■□□□□ 0.32
PDGFB-201ENST00000331163 INHAP05111 366 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 GNAT1P11488 350 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 ARF4P18085 180 aaPredicted RBP17.04■□□□□ 0.32
PDGFB-201ENST00000331163 PDE6CP51160 858 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 MFAP3P55082 362 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms