RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 LRRC19Q9H756 370 aa25.92■■□□□ 1.74
SOX1-201ENST00000330949 UBN1Q9NPG3 1134 aa25.92■■□□□ 1.74
SOX1-201ENST00000330949 GALNT8Q9NY28 637 aa25.92■■□□□ 1.74
SOX1-201ENST00000330949 C2CD2LO14523 706 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 CYP11B2P19099 503 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 CAV1Q03135 178 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 KRT17Q04695 432 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 DRAP1Q14919 205 aaPredicted RBP25.91■■□□□ 1.74
SOX1-201ENST00000330949 PDK4Q16654 411 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 ZC2HC1CQ53FD0 456 aaPredicted RBP25.91■■□□□ 1.74
SOX1-201ENST00000330949 MORC4Q8TE76 937 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 METTL5Q9NRN9 209 aaKnown RBP25.91■■□□□ 1.74
SOX1-201ENST00000330949 DDX43Q9NXZ2 648 aaKnown RBP25.91■■□□□ 1.74
SOX1-201ENST00000330949 LDHBP07195 334 aaKnown RBP25.91■■□□□ 1.74
SOX1-201ENST00000330949 CETPP11597 493 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 NLRP9Q7RTR0 991 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 CLNKQ7Z7G1 428 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 NINJ2Q9NZG7 142 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 KIAA1024Q9UPX6 916 aa25.91■■□□□ 1.74
SOX1-201ENST00000330949 TCRBV7S2A1N4TA0A589 114 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 MARCH6O60337 910 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 PYGMP11217 842 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 NFIXQ14938 502 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 DAB2IPQ5VWQ8 1189 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 STKLD1Q8NE28 680 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 SPOCK2Q92563 424 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 MIS12Q9H081 205 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 TAS2R14Q9NYV8 317 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 UBTFL6P0CB48 400 aaPredicted RBP25.9■■□□□ 1.74
SOX1-201ENST00000330949 TMEM63BQ5T3F8 832 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 C12orf60Q5U649 245 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 CLEC4GQ6UXB4 293 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 ZNF398Q8TD17 642 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 UBA5Q9GZZ9 404 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 IL1RAPL1Q9NZN1 696 aa25.9■■□□□ 1.74
SOX1-201ENST00000330949 CASP5P51878 434 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 SLC18A1P54219 525 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 LSAMPQ13449 338 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 SIX1Q15475 284 aaPredicted RBP25.89■■□□□ 1.74
SOX1-201ENST00000330949 RNF207Q6ZRF8 634 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 SMC1BQ8NDV3 1235 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 OLFM3Q96PB7 478 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 ASCC2Q9H1I8 757 aaPredicted RBP25.89■■□□□ 1.74
SOX1-201ENST00000330949 DNAJC12Q9UKB3 198 aa25.89■■□□□ 1.74
SOX1-201ENST00000330949 TMEM110-MUSTN1A8MSY1 372 aa25.89■■□□□ 1.73
SOX1-201ENST00000330949 hCG_1984214I3L0E3 225 aa25.89■■□□□ 1.73
SOX1-201ENST00000330949 TCEAL1Q15170 157 aa25.89■■□□□ 1.73
SOX1-201ENST00000330949 LIN52Q52LA3 116 aa25.89■■□□□ 1.73
SOX1-201ENST00000330949 ACBD5Q5T8D3 534 aaPredicted RBP25.89■■□□□ 1.73
SOX1-201ENST00000330949 ZNF713Q8N859 430 aaPredicted RBP25.89■■□□□ 1.73
SOX1-201ENST00000330949 MCUR1Q96AQ8 359 aa25.89■■□□□ 1.73
SOX1-201ENST00000330949 PREBQ9HCU5 417 aa25.89■■□□□ 1.73
SOX1-201ENST00000330949 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 COMTP21964 271 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 SMARCA1P28370 1054 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 EIF6P56537 245 aaKnown RBP25.88■■□□□ 1.73
SOX1-201ENST00000330949 CTC1Q2NKJ3 1217 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 FYB2Q5VWT5 728 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 POP1Q99575 1024 aaKnown RBP25.88■■□□□ 1.73
SOX1-201ENST00000330949 EURLQ9NYK6 297 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 PCDHA12Q9UN75 941 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 GMEB1Q9Y692 573 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 PRPF4O43172 522 aaKnown RBP eCLIP25.88■■□□□ 1.73
SOX1-201ENST00000330949 NR3C1P04150 777 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 TMED2Q15363 201 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 MTDHQ86UE4 582 aaKnown RBP25.88■■□□□ 1.73
SOX1-201ENST00000330949 DENND1AQ8TEH3 1009 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 DNAJC18Q9H819 358 aa25.88■■□□□ 1.73
SOX1-201ENST00000330949 GSC2O15499 205 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 EDIL3O43854 480 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 SCNN1BP51168 640 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 ADCY7P51828 1080 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 PHLDB3Q6NSJ2 640 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 SYDE1Q6ZW31 735 aaPredicted RBP25.87■■□□□ 1.73
SOX1-201ENST00000330949 PIGSQ96S52 555 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 MMADHCQ9H3L0 296 aaPredicted RBP25.87■■□□□ 1.73
SOX1-201ENST00000330949 DNAJC17Q9NVM6 304 aaKnown RBP25.87■■□□□ 1.73
SOX1-201ENST00000330949 ROBO1Q9Y6N7 1651 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 UMODL1Q5DID0 1318 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 WDR72Q3MJ13 1102 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 SH2D4BQ5SQS7 431 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 DTX3LQ8TDB6 740 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 KRT82Q9NSB4 513 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 DDX25Q9UHL0 483 aaKnown RBP25.87■■□□□ 1.73
SOX1-201ENST00000330949 SMG5Q9UPR3 1016 aaKnown RBP25.87■■□□□ 1.73
SOX1-201ENST00000330949 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.87■■□□□ 1.73
SOX1-201ENST00000330949 GYG2O15488 501 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 ZCCHC18P0CG32 403 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 CDK7P50613 346 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 ITGA8P53708 1063 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 MAML1Q92585 1016 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 TRAIPQ9BWF2 469 aa25.87■■□□□ 1.73
SOX1-201ENST00000330949 EXOC3O60645 756 aa25.86■■□□□ 1.73
SOX1-201ENST00000330949 LGR5O75473 907 aa25.86■■□□□ 1.73
SOX1-201ENST00000330949 TPP2P29144 1249 aaPredicted RBP25.86■■□□□ 1.73
SOX1-201ENST00000330949 MESDQ14696 234 aa25.86■■□□□ 1.73
SOX1-201ENST00000330949 HAS1Q92839 578 aa25.86■■□□□ 1.73
SOX1-201ENST00000330949 CDCA7Q9BWT1 371 aaPredicted RBP25.86■■□□□ 1.73
SOX1-201ENST00000330949 CYLDQ9NQC7 956 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms