RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SUPT20HQ8NEM7 779 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 DYDC2Q96IM9 177 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 PCDHB18PQ96TA0 734 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 CRISPLD2Q9H0B8 497 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 DDX4Q9NQI0 724 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 METTL5Q9NRN9 209 aaKnown RBP8.42□□□□□ -1.06
VMA21-201ENST00000330374 PCYOX1Q9UHG3 505 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 ANAPC5Q9UJX4 755 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 NAALADL1Q9UQQ1 740 aa8.42□□□□□ -1.06
VMA21-201ENST00000330374 BTNL9Q6UXG8 535 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ANKLE1Q8NAG6 615 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 KIAA1683Q9H0B3 1180 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 KCNQ5Q9NR82 932 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 GPR75-ASB3A0A0A6YYF3 556 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 MIF4GDA9UHW6 222 aaKnown RBP8.41□□□□□ -1.06
VMA21-201ENST00000330374 SLC16A3O15427 465 aaKnown RBP8.41□□□□□ -1.06
VMA21-201ENST00000330374 MSH4O15457 936 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ATP4AP20648 1035 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 CTNNA2P26232 953 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 DRG2P55039 364 aaKnown RBP8.41□□□□□ -1.06
VMA21-201ENST00000330374 GPSM2P81274 684 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 BLMHQ13867 455 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 CCDC6Q16204 474 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 CDCA2Q69YH5 1023 aaPredicted RBP8.41□□□□□ -1.06
VMA21-201ENST00000330374 SLC47A2Q86VL8 602 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 CCDC134Q9H6E4 229 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ALG13Q9NP73 1137 aaKnown RBP8.41□□□□□ -1.06
VMA21-201ENST00000330374 DCTN4Q9UJW0 460 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ZBTB21Q9ULJ3 1066 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 UNC5CO95185 931 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 BCRP11274 1271 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ALADP13716 330 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 KRT15P19012 456 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 SMARCA1P28370 1054 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 MUM1Q2TAK8 710 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 SPDYCQ5MJ68 293 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ARHGEF18Q6ZSZ5 1173 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 GSTA5Q7RTV2 222 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 CCDC127Q96BQ5 260 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 LRRC37BQ96QE4 947 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 RAB3IPQ96QF0 476 aaPredicted RBP8.41□□□□□ -1.06
VMA21-201ENST00000330374 NYXQ9GZU5 481 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 AGPAT3Q9NRZ7 376 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 INPP5FQ9Y2H2 1132 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 PCDHA3Q9Y5H8 950 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 GNAT1P11488 350 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 ATF2P15336 505 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 GM2AP17900 193 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 PEX5P50542 639 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 RWDD2BP57060 319 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 SPIRE1Q08AE8 756 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 CROCCP2Q86T23 111 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 SLC5A5Q92911 643 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 TSC22D3Q99576 134 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 PARVGQ9HBI0 331 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 NINJ2Q9NZG7 142 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 PRKAG2Q9UGJ0 569 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 TCEAL9Q9UHQ7 104 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 SERPINB13Q9UIV8 391 aa8.41□□□□□ -1.06
VMA21-201ENST00000330374 SCN7AQ01118 1682 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 RREB1Q92766 1687 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 PRMT3O60678 531 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 GJB6O95452 261 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 TTC4O95801 387 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 TAC1P20366 129 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 ANXA13P27216 316 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 ATP5DP30049 168 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 TMEM154Q6P9G4 183 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 TRMT10CQ7L0Y3 403 aaKnown RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 ETNPPLQ8TBG4 499 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 DTX3LQ8TDB6 740 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 KLHL11Q9NVR0 708 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 CORO1CQ9ULV4 474 aaPredicted RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 ZMYM2Q9UBW7 1377 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 S100BP04271 92 aaPredicted RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 OVGP1Q12889 678 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 ASRGL1Q7L266 308 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 APBB1IPQ7Z5R6 666 aaPredicted RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 NOP9Q86U38 636 aaKnown RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 FAM13CQ8NE31 585 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 CNKSR1Q969H4 720 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 SERPINB12Q96P63 405 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 RPS6KC1Q96S38 1066 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 C12orf65Q9H3J6 166 aaKnown RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 TXLNGQ9NUQ3 528 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 DLGAP2Q9P1A6 1054 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 PHTF1Q9UMS5 762 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.06
VMA21-201ENST00000330374 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
VMA21-201ENST00000330374 LRRD1A4D1F6 860 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 MEIS2O14770 477 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 LUC7L3O95232 432 aaKnown RBP8.4□□□□□ -1.07
VMA21-201ENST00000330374 TM4SF1P30408 202 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 POLE2P56282 527 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 IL9RQ01113 521 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 PPP3CAQ08209 521 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 BFSP1Q12934 665 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms