RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SMG8Q8ND04 991 aaKnown RBP16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 CNNM3Q8NE01 707 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 LNX1Q8TBB1 728 aaPredicted RBP16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 DEPDC1BQ8WUY9 529 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 ZFP42Q96MM3 310 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 ASB16Q96NS5 453 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 TTPALQ9BTX7 342 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 DUSP15Q9H1R2 295 aaPredicted RBP16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 CELSR3Q9NYQ7 3312 aa16.54■□□□□ 0.24
CTHRC1-201ENST00000330295 SF3B1O75533 1304 aaKnown RBP eCLIP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 BCLAF3A2AJT9 711 aaKnown RBP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 ARNTLO00327 626 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 CDX4O14627 284 aaPredicted RBP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 EXTL3O43909 919 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 TADA2AO75478 443 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 GNAQP50148 359 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 RTL10Q7L3V2 364 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 KSR1Q8IVT5 923 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 HNRNPLLQ8WVV9 542 aaKnown RBP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 RABGGTAQ92696 567 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 LRIG1Q96JA1 1093 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 APOL6Q9BWW8 343 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 C8orf33Q9H7E9 229 aaPredicted RBP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 IFT122Q9HBG6 1241 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 SUCLA2Q9P2R7 463 aaPredicted RBP16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 IPPQ9Y573 584 aa16.53■□□□□ 0.24
CTHRC1-201ENST00000330295 APC2O95996 2303 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 NUP205Q92621 2012 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 IGKV6-21A0A0C4DH24 114 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 DDAH1O94760 285 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 SOX9P48436 509 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 SCAPQ12770 1279 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 ELF2Q15723 593 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 CEP57Q86XR8 500 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 SYNPOQ8N3V7 929 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 CSGALNACT1Q8TDX6 532 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 SLC32A1Q9H598 525 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 RIC8AQ9NPQ8 531 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 IGSF5Q9NSI5 407 aa16.52■□□□□ 0.24
CTHRC1-201ENST00000330295 TENM4Q6N022 2769 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 WDR27A2RRH5 827 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 SLC38A8A6NNN8 435 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 WDR64B1ANS9 1081 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 PRB1P04280 392 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 PTPN2P17706 415 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 KPNA1P52294 538 aaPredicted RBP16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 SIM1P81133 766 aaPredicted RBP16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 CCINQ13939 588 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 RAB33AQ14088 237 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 UGCGQ16739 394 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 PRSS36Q5K4E3 855 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 TXNDC11Q6PKC3 985 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 SMARCD2Q92925 531 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
CTHRC1-201ENST00000330295 SPAARA0A1B0GVQ0 90 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 H0Y626 953 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 RHOBTB1O94844 696 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 TRIM16O95361 564 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 VIPR2P41587 438 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 MTERF2Q49AM1 385 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 MFSD6LQ8IWD5 586 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 TCEAL4Q96EI5 215 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 DISC1Q9NRI5 854 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 HES2Q9Y543 173 aa16.5■□□□□ 0.23
CTHRC1-201ENST00000330295 NCANO14594 1321 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 MYBPHLA2RUH7 354 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 SPECC1L-ADORA2AF8WAN1 911 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 MICAL2O94851 1124 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 PLA2G2AP14555 144 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 CTHP32929 405 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 OR1D2P34982 312 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 SETQ01105 290 aaPredicted RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 AP3B2Q13367 1082 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 LARP1BQ659C4 914 aaKnown RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 PDXDC1Q6P996 788 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 RALGPS2Q86X27 583 aaPredicted RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 CHCHD4Q8N4Q1 142 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 FAM200AQ8TCP9 573 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 IGDCC4Q8TDY8 1250 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 HASPINQ8TF76 798 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 MINDY3Q9H8M7 445 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 SCUBE2Q9NQ36 999 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 CACNG4Q9UBN1 327 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 SEPT9Q9UHD8 586 aaPredicted RBP16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms