RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ACRV1P26436 265 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 KIR2DL3P43628 341 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 DUSP2Q05923 314 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 GAGE13Q4V321 117 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 FAM180AQ6UWF9 173 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 Q6ZRM9 215 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 TAS1R1Q7RTX1 841 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 RSPH3Q86UC2 560 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 OR5M3Q8NGP4 307 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 DIS3LQ8TF46 1054 aaKnown RBP5.03□□□□□ -1.6
SKP1-201ENST00000328392 ZNF341Q9BYN7 854 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 SENP6Q9GZR1 1112 aaPredicted RBP5.03□□□□□ -1.6
SKP1-201ENST00000328392 C14orf93Q9H972 538 aaKnown RBP5.03□□□□□ -1.6
SKP1-201ENST00000328392 ARMT1Q9H993 441 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 HS3ST3A1Q9Y663 406 aa5.03□□□□□ -1.6
SKP1-201ENST00000328392 MAP4K4O95819 1239 aaPredicted RBP5.02□□□□□ -1.61
SKP1-201ENST00000328392 JUNP05412 331 aaKnown RBP5.02□□□□□ -1.61
SKP1-201ENST00000328392 KRT18P05783 430 aaKnown RBP5.02□□□□□ -1.61
SKP1-201ENST00000328392 U2AF1L5P0DN76 240 aaPredicted RBP5.02□□□□□ -1.61
SKP1-201ENST00000328392 SLC6A9P48067 706 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 SCNN1GP51170 649 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 U2AF1Q01081 240 aaKnown RBP eCLIP5.02□□□□□ -1.619e-7■■■■□ 24.3
SKP1-201ENST00000328392 HHEXQ03014 270 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 MGAT2Q10469 447 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 MST1LQ2TV78 715 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 MIIPQ5JXC2 388 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 ATAT1Q5SQI0 421 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 B3GNT9Q6UX72 402 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 ZFPM1Q8IX07 1006 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 DRC7Q8IY82 874 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 ZNF480Q8WV37 535 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 TMX3Q96JJ7 454 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 CLPTM1LQ96KA5 538 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 VRK1Q99986 396 aaPredicted RBP5.02□□□□□ -1.61
SKP1-201ENST00000328392 TCF25Q9BQ70 676 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 TDP1Q9NUW8 608 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 GPRC5DQ9NZD1 345 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 AJAP1Q9UKB5 411 aaPredicted RBP5.02□□□□□ -1.61
SKP1-201ENST00000328392 SIK3Q9Y2K2 1263 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 PCDHB1Q9Y5F3 818 aa5.02□□□□□ -1.61
SKP1-201ENST00000328392 FAM171A2A8MVW0 826 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 WNT10BO00744 389 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 FTLP02792 175 aaPredicted RBP5.01□□□□□ -1.61
SKP1-201ENST00000328392 SLPIP03973 132 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 FPR1P21462 350 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 ACVRL1P37023 503 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 MEF2AQ02078 507 aaPredicted RBP5.01□□□□□ -1.61
SKP1-201ENST00000328392 TARDBPQ13148 414 aaKnown RBP eCLIP5.01□□□□□ -1.61
SKP1-201ENST00000328392 RRP1BQ14684 758 aaKnown RBP5.01□□□□□ -1.61
SKP1-201ENST00000328392 FAM214AQ32MH5 1076 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 MAP9Q49MG5 647 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 DGKHQ86XP1 1220 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
SKP1-201ENST00000328392 ELOA2Q8IYF1 753 aaPredicted RBP5.01□□□□□ -1.61
SKP1-201ENST00000328392 CMTM4Q8IZR5 234 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 ZGPATQ8N5A5 531 aaKnown RBP5.01□□□□□ -1.61
SKP1-201ENST00000328392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.01□□□□□ -1.61
SKP1-201ENST00000328392 RUNDC1Q96C34 613 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 PLEKHG4BQ96PX9 1271 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 MPHOSPH9Q99550 1183 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 CEP72Q9P209 647 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 TRPS1Q9UHF7 1281 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 PCDHA3Q9Y5H8 950 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 ZMYM3Q14202 1370 aa5.01□□□□□ -1.61
SKP1-201ENST00000328392 MYBBP1AQ9BQG0 1328 aaKnown RBP5□□□□□ -1.61
SKP1-201ENST00000328392 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
SKP1-201ENST00000328392 A6NNZ2 444 aa5□□□□□ -1.61
SKP1-201ENST00000328392 FZD7O75084 574 aa5□□□□□ -1.61
SKP1-201ENST00000328392 PHF2O75151 1096 aa5□□□□□ -1.61
SKP1-201ENST00000328392 CAND2O75155 1236 aa5□□□□□ -1.61
SKP1-201ENST00000328392 ENDOD1O94919 500 aa5□□□□□ -1.61
SKP1-201ENST00000328392 SREBF1P36956 1147 aa5□□□□□ -1.61
SKP1-201ENST00000328392 DSC2Q02487 901 aa5□□□□□ -1.61
SKP1-201ENST00000328392 PTH1RQ03431 593 aa5□□□□□ -1.61
SKP1-201ENST00000328392 KLF10Q13118 480 aa5□□□□□ -1.61
SKP1-201ENST00000328392 ELAVL1Q15717 326 aaKnown RBP5□□□□□ -1.61
SKP1-201ENST00000328392 PRAMEF14Q5SWL7 426 aa5□□□□□ -1.61
SKP1-201ENST00000328392 CCDC149Q6ZUS6 474 aa5□□□□□ -1.61
SKP1-201ENST00000328392 DENND1CQ8IV53 801 aa5□□□□□ -1.61
SKP1-201ENST00000328392 PRR18Q8N4B5 295 aa5□□□□□ -1.61
SKP1-201ENST00000328392 LILRA3Q8N6C8 439 aaPredicted RBP5□□□□□ -1.61
SKP1-201ENST00000328392 CACTINQ8WUQ7 758 aaKnown RBP5□□□□□ -1.61
SKP1-201ENST00000328392 HOXB13Q92826 284 aaPredicted RBP5□□□□□ -1.61
SKP1-201ENST00000328392 RGMAQ96B86 450 aa5□□□□□ -1.61
SKP1-201ENST00000328392 ARL8AQ96BM9 186 aa5□□□□□ -1.61
SKP1-201ENST00000328392 PAWRQ96IZ0 340 aaKnown RBP5□□□□□ -1.61
SKP1-201ENST00000328392 ZNF512Q96ME7 567 aaPredicted RBP5□□□□□ -1.61
SKP1-201ENST00000328392 CDC5LQ99459 802 aaKnown RBP5□□□□□ -1.61
SKP1-201ENST00000328392 CGRRF1Q99675 332 aa5□□□□□ -1.61
SKP1-201ENST00000328392 PRDM11Q9NQV5 511 aa5□□□□□ -1.61
SKP1-201ENST00000328392 SLC52A1Q9NWF4 448 aa5□□□□□ -1.61
SKP1-201ENST00000328392 STAP2Q9UGK3 403 aa5□□□□□ -1.61
SKP1-201ENST00000328392 ING1Q9UK53 422 aaPredicted RBP5□□□□□ -1.61
SKP1-201ENST00000328392 NR2E3Q9Y5X4 410 aa5□□□□□ -1.61
SKP1-201ENST00000328392 ACTL7AQ9Y615 435 aa5□□□□□ -1.61
SKP1-201ENST00000328392 CCDC194A0A1B0GVG4 234 aa4.99□□□□□ -1.61
SKP1-201ENST00000328392 ERC2O15083 957 aa4.99□□□□□ -1.61
SKP1-201ENST00000328392 UBXN7O94888 489 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms