RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ANKRD31Q8N7Z5 1873 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 PASKQ96RG2 1323 aa21.25■□□□□ 0.99
CRLF3-201ENST00000324238 DRG2P55039 364 aaKnown RBP21.24■□□□□ 0.99
CRLF3-201ENST00000324238 RWDD2BP57060 319 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 SNRNP35Q16560 246 aaKnown RBP21.24■□□□□ 0.99
CRLF3-201ENST00000324238 CCDC50Q8IVM0 306 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 NOD2Q9HC29 1040 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 TELO2Q9Y4R8 837 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 GREB1LQ9C091 1923 aaPredicted RBP21.24■□□□□ 0.99
CRLF3-201ENST00000324238 CFHP08603 1231 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 ITGA8P53708 1063 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 C3orf20Q8ND61 904 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 STAMBPL1Q96FJ0 436 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 MXRA8Q9BRK3 442 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 USTQ9Y2C2 406 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 ATP9AO75110 1047 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 NF2P35240 595 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 PPP2R5EQ16537 467 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 NFIL3Q16649 462 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 CHURC1Q8WUH1 139 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 POMGNT1Q8WZA1 660 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 WNT8AQ9H1J5 351 aa21.24■□□□□ 0.99
CRLF3-201ENST00000324238 MRPL11Q9Y3B7 192 aaKnown RBP21.24■□□□□ 0.99
CRLF3-201ENST00000324238 ENTPD3O75355 529 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 ATP6V1G2O95670 118 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 PREPLQ4J6C6 727 aaPredicted RBP21.23■□□□□ 0.99
CRLF3-201ENST00000324238 FAM47EQ6ZV65 393 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 CENPTQ96BT3 561 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 PIAS1O75925 651 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 ADCY8P40145 1251 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 MTM1Q13496 603 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 XKR9Q5GH70 373 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 CYP4F22Q6NT55 531 aa21.23■□□□□ 0.99
CRLF3-201ENST00000324238 SRRM1Q8IYB3 904 aaKnown RBP21.23■□□□□ 0.99
CRLF3-201ENST00000324238 TESPA1A2RU30 521 aaPredicted RBP21.22■□□□□ 0.99
CRLF3-201ENST00000324238 RRM1P23921 792 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 MAPK4P31152 587 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 VSTM1Q6UX27 236 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 SLC9A9Q8IVB4 645 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 RPS6KC1Q96S38 1066 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 KIF13BQ9NQT8 1826 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 EIF4E1BA6NMX2 242 aaKnown RBP21.22■□□□□ 0.99
CRLF3-201ENST00000324238 PLS3P13797 630 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 YWHABP31946 246 aaKnown RBP21.22■□□□□ 0.99
CRLF3-201ENST00000324238 SPOPLQ6IQ16 392 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 ARMC9Q7Z3E5 817 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 TAOK3Q9H2K8 898 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 TCEAL9Q9UHQ7 104 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 SLX4Q8IY92 1834 aa21.22■□□□□ 0.99
CRLF3-201ENST00000324238 SNX3O60493 162 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 PRAMEF18Q5VWM3 479 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 PSPC1Q8WXF1 523 aaKnown RBP21.21■□□□□ 0.99
CRLF3-201ENST00000324238 LTBP1Q14766 1721 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 DHX15O43143 795 aaKnown RBP21.21■□□□□ 0.99
CRLF3-201ENST00000324238 ASAP2O43150 1006 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 THAP12O43422 761 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 SCP2P22307 547 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 PDE6CP51160 858 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 SLMAPQ14BN4 828 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 ANKS1BQ7Z6G8 1248 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 HELQQ8TDG4 1101 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 TAAR1Q96RJ0 339 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 MCM8Q9UJA3 840 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 P4HBP07237 508 aaKnown RBP21.21■□□□□ 0.99
CRLF3-201ENST00000324238 BRAFP15056 766 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 ZFYVE27Q5T4F4 411 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 TMEM206Q9H813 350 aa21.21■□□□□ 0.99
CRLF3-201ENST00000324238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.21■□□□□ 0.99
CRLF3-201ENST00000324238 CNOT7Q9UIV1 285 aaKnown RBP21.21■□□□□ 0.99
CRLF3-201ENST00000324238 MGRN1O60291 552 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 ATP8B3O60423 1300 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 SPAG7O75391 227 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 DNAJC8O75937 253 aaPredicted RBP21.2■□□□□ 0.98
CRLF3-201ENST00000324238 CNGA1P29973 690 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 MFAP3P55082 362 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 MRPS9P82933 396 aaKnown RBP21.2■□□□□ 0.98
CRLF3-201ENST00000324238 MYO1EQ12965 1108 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 SCARA3Q6AZY7 606 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 B3GNT9Q6UX72 402 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 TAB3Q8N5C8 712 aaPredicted RBP21.2■□□□□ 0.98
CRLF3-201ENST00000324238 SHC3Q92529 594 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 TACO1Q9BSH4 297 aaKnown RBP21.2■□□□□ 0.98
CRLF3-201ENST00000324238 ECT2Q9H8V3 914 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 PI4K2BG5E9Z4 385 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 IGF2BP3O00425 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
CRLF3-201ENST00000324238 EGFRP00533 1210 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 CD58P19256 250 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 NEDD9Q14511 834 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 ATP13A4Q4VNC1 1196 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 BSNDQ8WZ55 320 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 SPOCK2Q92563 424 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 ACSF2Q96CM8 615 aaPredicted RBP21.2■□□□□ 0.98
CRLF3-201ENST00000324238 RMDN2Q96LZ7 410 aa21.2■□□□□ 0.98
CRLF3-201ENST00000324238 DENND3A2RUS2 1198 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 QARSP47897 775 aaKnown RBP21.19■□□□□ 0.98
CRLF3-201ENST00000324238 KAZNQ674X7 775 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 SV2AQ7L0J3 742 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 PARD3BQ8TEW8 1205 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 RANBP17Q9H2T7 1088 aaKnown RBP21.19■□□□□ 0.98
CRLF3-201ENST00000324238 PARP2Q9UGN5 583 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms