RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 MORF4L1Q9UBU8 362 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 NXF1Q9UBU9 619 aaKnown RBP9.82□□□□□ -0.84
CD46-202ENST00000322918 GTPBP10A4D1E9 387 aaKnown RBP9.82□□□□□ -0.84
CD46-202ENST00000322918 MSCO60682 206 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 AOC2O75106 756 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 CST3P01034 146 aaPredicted RBP9.82□□□□□ -0.84
CD46-202ENST00000322918 H2AFZP0C0S5 128 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 ATF7IP2Q5U623 682 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 H2AFVQ71UI9 128 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 DAAM2Q86T65 1068 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 NOP9Q86U38 636 aaKnown RBP9.82□□□□□ -0.84
CD46-202ENST00000322918 SYN2Q92777 582 aaPredicted RBP9.82□□□□□ -0.84
CD46-202ENST00000322918 BTBD6Q96KE9 485 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 C16orf70Q9BSU1 422 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 VTA1Q9NP79 307 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 C1orf112Q9NSG2 853 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 LCMT1Q9UIC8 334 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 HES2Q9Y543 173 aa9.82□□□□□ -0.84
CD46-202ENST00000322918 LAMA3Q16787 3333 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 A0A0B4J269 797 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 LGR5O75473 907 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 C22orf31O95567 290 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 MMP3P08254 477 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 C6orf222P0C671 652 aaPredicted RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 GARTP22102 1010 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 HTRA3P83110 453 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 MXD4Q14582 209 aaPredicted RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 GRIK4Q16099 956 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 WDR44Q5JSH3 913 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 TMEM270Q6UE05 265 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 SRGAP1Q7Z6B7 1085 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 IFNL1Q8IU54 200 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 TCP11Q8WWU5 503 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 GOLGA1Q92805 767 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 ARHGEF26Q96DR7 871 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 MFSD14AQ96MC6 490 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 CDHR5Q9HBB8 845 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 WDR81Q562E7 1941 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 H0YCG3 227 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 N4BP1O75113 896 aaKnown RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 PGK1P00558 417 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 FTLP02792 175 aaPredicted RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 WEE2P0C1S8 567 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 CHRM1P11229 460 aaPredicted RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 H2AFXP16104 143 aaPredicted RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 CTGFP29279 349 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 MFAP3P55082 362 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 RTP1P59025 263 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 MAP2K5Q13163 448 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 NAB2Q15742 525 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 DGKDQ16760 1214 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 DUSP28Q4G0W2 176 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 FAM47CQ5HY64 1035 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 USP37Q86T82 979 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 PPTC7Q8NI37 304 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 CTNNBL1Q8WYA6 563 aaPredicted RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 OSMRQ99650 979 aa9.81□□□□□ -0.84
CD46-202ENST00000322918 ACO2Q99798 780 aaKnown RBP9.81□□□□□ -0.84
CD46-202ENST00000322918 KCNK3O14649 394 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 TOM1L1O75674 476 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 CFHP08603 1231 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 TRIM32Q13049 653 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 KIAA0319LQ8IZA0 1049 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 CPA5Q8WXQ8 436 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 HVCN1Q96D96 273 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 AGPAT1Q99943 283 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 PARD6BQ9BYG5 372 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 KATNBL1Q9H079 304 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 ZCCHC17Q9NP64 241 aaKnown RBP9.8□□□□□ -0.84
CD46-202ENST00000322918 CTTNBP2NLQ9P2B4 639 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 GRID2IPA4D2P6 1211 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 EFCAB8A8MWE9 144 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 MYO1CO00159 1063 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 PPFIA4O75335 1185 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 VNN1O95497 513 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 TMOD1P28289 359 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 MYL6P60660 151 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 AMPD2Q01433 879 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 SLC7A5Q01650 507 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 NCOA4Q13772 614 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 TFDP1Q14186 410 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 MYBPC2Q14324 1141 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 NAA35Q5VZE5 725 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 SLFN12LQ6IEE8 588 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 TRAPPC11Q7Z392 1133 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 GSPT2Q8IYD1 628 aaKnown RBP9.8□□□□□ -0.84
CD46-202ENST00000322918 HELQQ8TDG4 1101 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 GTF3C2Q8WUA4 911 aaPredicted RBP9.8□□□□□ -0.84
CD46-202ENST00000322918 PCDHB18PQ96TA0 734 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 IFT122Q9HBG6 1241 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 APOBEC3GQ9HC16 384 aaKnown RBP9.8□□□□□ -0.84
CD46-202ENST00000322918 JRKLQ9Y4A0 524 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 PCDHB4Q9Y5E5 795 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 BZW2Q9Y6E2 419 aaKnown RBP9.8□□□□□ -0.84
CD46-202ENST00000322918 MANSC4A6NHS7 340 aaPredicted RBP9.8□□□□□ -0.84
CD46-202ENST00000322918 GPR25O00155 361 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 ERLIN2O94905 339 aa9.8□□□□□ -0.84
CD46-202ENST00000322918 TMEM191BP0C7N4 346 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms