RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 A1CFQ9NQ94 594 aaKnown RBP23.98■■□□□ 1.43
PNKP-201ENST00000322344 LTBP3Q9NS15 1303 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 GRIN3BO60391 1043 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 KRT5P13647 590 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 LIG4P49917 911 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 BPIFB4P59827 614 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 PSMD6Q15008 389 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 AADACL2Q6P093 401 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 POTEAQ6S8J7 498 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 B4GALNT4Q76KP1 1039 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 TAS1R3Q7RTX0 852 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 SPATS2Q86XZ4 545 aaKnown RBP23.97■■□□□ 1.43
PNKP-201ENST00000322344 DHX38Q92620 1227 aaKnown RBP23.97■■□□□ 1.43
PNKP-201ENST00000322344 C18orf8Q96DM3 657 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 TRIM11Q96F44 468 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 CNOT8Q9UFF9 292 aaKnown RBP23.97■■□□□ 1.43
PNKP-201ENST00000322344 GJA3Q9Y6H8 435 aa23.97■■□□□ 1.43
PNKP-201ENST00000322344 PYGMP11217 842 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 GUCY1A3Q02108 690 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 PTGISQ16647 500 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 C10orf67Q8IYJ2 551 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 FAM129AQ9BZQ8 928 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 AVENQ9NQS1 362 aaPredicted RBP23.96■■□□□ 1.43
PNKP-201ENST00000322344 HOXC10Q9NYD6 342 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 STYXL1Q9Y6J8 313 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 COL11A1P12107 1806 aaPredicted RBP23.96■■□□□ 1.43
PNKP-201ENST00000322344 MYBL1P10243 752 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 STRN3Q13033 797 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 EMC2Q15006 297 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 WDR44Q5JSH3 913 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 C12orf50Q8NA57 414 aaPredicted RBP23.96■■□□□ 1.43
PNKP-201ENST00000322344 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
PNKP-201ENST00000322344 CHORDC1Q9UHD1 332 aaPredicted RBP23.96■■□□□ 1.43
PNKP-201ENST00000322344 ATP8A1Q9Y2Q0 1164 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 SNX24Q9Y343 169 aa23.96■■□□□ 1.43
PNKP-201ENST00000322344 FZD9O00144 591 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 NUDT17P0C025 328 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 ICAM3P32942 547 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 MAGEA9P43362 315 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 FNTAP49354 379 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 MTERF2Q49AM1 385 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 CCDC137Q6PK04 289 aaKnown RBP23.95■■□□□ 1.42
PNKP-201ENST00000322344 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 HOOK3Q86VS8 718 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 FNBP1Q96RU3 617 aa23.95■■□□□ 1.42
PNKP-201ENST00000322344 MTRF1LQ9UGC7 380 aaKnown RBP23.95■■□□□ 1.42
PNKP-201ENST00000322344 POLGP54098 1239 aaPredicted RBP23.94■■□□□ 1.42
PNKP-201ENST00000322344 PMS2P54278 862 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 SP4Q02446 784 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 IFFO1Q0D2I5 559 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 KRT71Q3SY84 523 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 ZDHHC24Q6UX98 284 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 PSPC1Q8WXF1 523 aaKnown RBP23.94■■□□□ 1.42
PNKP-201ENST00000322344 PCDHB2Q9Y5E7 798 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 WDR81Q562E7 1941 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 TRIM66O15016 1216 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 PIGRP01833 764 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 UNGP13051 313 aaPredicted RBP23.94■■□□□ 1.42
PNKP-201ENST00000322344 HPDP32754 393 aaPredicted RBP23.94■■□□□ 1.42
PNKP-201ENST00000322344 COILP38432 576 aaPredicted RBP23.94■■□□□ 1.42
PNKP-201ENST00000322344 PLTPP55058 493 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 ZACNQ401N2 412 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 SLFN12LQ6IEE8 588 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 PABPC3Q9H361 631 aaKnown RBP23.94■■□□□ 1.42
PNKP-201ENST00000322344 GRHL1Q9NZI5 618 aa23.94■■□□□ 1.42
PNKP-201ENST00000322344 ATG7O95352 703 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 PPP2R2AP63151 447 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 STXBP2Q15833 593 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 SKIDA1Q1XH10 827 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 TTC27Q6P3X3 843 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 CROCCP2Q86T23 111 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 ZDHHC14Q8IZN3 488 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 DNERQ8NFT8 737 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 ZNF516Q92618 1163 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 BTBD6Q96KE9 485 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 PAGR1Q9BTK6 254 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 MAFBQ9Y5Q3 323 aaPredicted RBP23.93■■□□□ 1.42
PNKP-201ENST00000322344 ATXN2Q99700 1313 aaKnown RBP23.93■■□□□ 1.42
PNKP-201ENST00000322344 OATP04181 439 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 MAPK4P31152 587 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 NAMPTP43490 491 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 NOL9Q5SY16 702 aaKnown RBP23.93■■□□□ 1.42
PNKP-201ENST00000322344 CYFIP1Q7L576 1253 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 CHST13Q8NET6 341 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 MAIP1Q8WWC4 291 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 PI4K2AQ9BTU6 479 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 ZNF302Q9NR11 478 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 BCCIPQ9P287 314 aaKnown RBP eCLIP23.93■■□□□ 1.42
PNKP-201ENST00000322344 SLC12A6Q9UHW9 1150 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 AGO2Q9UKV8 859 aaKnown RBP23.93■■□□□ 1.42
PNKP-201ENST00000322344 TELO2Q9Y4R8 837 aa23.93■■□□□ 1.42
PNKP-201ENST00000322344 KIAA1217Q5T5P2 1943 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
PNKP-201ENST00000322344 PASKQ96RG2 1323 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 LDHAP00338 332 aaKnown RBP23.92■■□□□ 1.42
PNKP-201ENST00000322344 SLC1A1P43005 524 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 SIX1Q15475 284 aaPredicted RBP23.92■■□□□ 1.42
PNKP-201ENST00000322344 ODF2Q5BJF6 829 aa23.92■■□□□ 1.42
PNKP-201ENST00000322344 ANGEL2Q5VTE6 544 aaKnown RBP23.92■■□□□ 1.42
PNKP-201ENST00000322344 CCDC105Q8IYK2 499 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms