RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 VCX3BQ9H321 246 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 KCNMB3Q9NPA1 279 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 TAS2R14Q9NYV8 317 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 C15orf41Q9Y2V0 281 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 SNX3O60493 162 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 ZWINTO95229 277 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 DRG2P55039 364 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 YWHAEP62258 255 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 CBWD6Q4V339 395 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 CBWD3Q5JTY5 395 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 CBWD5Q5RIA9 395 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 TRIM42Q8IWZ5 723 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 ATXN2LQ8WWM7 1075 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 IQANK1A0A1B0GTG1 560 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ENO4A6NNW6 628 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 MCF2LO15068 1137 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 OPHN1O60890 802 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 RARAP10276 462 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ARFIP2P53365 341 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 XRCC4Q13426 336 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 RXFP1Q9HBX9 757 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC12A6Q9UHW9 1150 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 NEU2Q9Y3R4 380 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ASTN1O14525 1302 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ALDH5A1P51649 535 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC8A3P57103 927 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 HYIQ5T013 277 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC30A10Q6XR72 485 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 PODNQ7Z5L7 613 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 RIBC1Q8N443 379 aaPredicted RBP13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SMC1BQ8NDV3 1235 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ATP2A3Q93084 1043 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 MAGEB18Q96M61 343 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 CALN1Q9BXU9 219 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 FOXP3Q9BZS1 431 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 DNAI2Q9GZS0 605 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 NCANO14594 1321 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 RALAP11233 206 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 CNGA2Q16280 664 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 SP8Q8IXZ3 490 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 CBWD1Q9BRT8 395 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 KLHL11Q9NVR0 708 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 MAD1L1Q9Y6D9 718 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 TARSP26639 723 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 MMP13P45452 471 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 NFIAQ12857 509 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 AUHQ13825 339 aaKnown RBP13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 KLHL38Q2WGJ6 581 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 PRELID2Q8N945 189 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 NPHS2Q9NP85 383 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 ANGPTL2Q9UKU9 493 aa13.53□□□□□ -0.24
DNMT3A-202ENST00000321117 MYH7P12883 1935 aa13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 GNA15P30679 374 aa13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 SHMT1P34896 483 aa13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 RHBDL3P58872 404 aa13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 ALG3Q92685 438 aa13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 MIEF2Q96C03 454 aa13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 MOV10L1Q9BXT6 1211 aaKnown RBP13.52□□□□□ -0.24
DNMT3A-202ENST00000321117 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 WDR64B1ANS9 1081 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 TMEM191BP0C7N4 346 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 CENPCQ03188 943 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 KRT81Q14533 505 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 ACAD10Q6JQN1 1059 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 PPARGC1AQ9UBK2 798 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 LACTB2Q53H82 288 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 PCGF5Q86SE9 256 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 ANKMY2Q8IV38 441 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 PIK3R5Q8WYR1 880 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 CCT6BQ92526 530 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 ZWILCHQ9H900 591 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 ROBO3Q96MS0 1386 aa13.52□□□□□ -0.25
DNMT3A-202ENST00000321117 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 EML1O00423 815 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 SKAP2O75563 359 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 RASSF9O75901 435 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 CYP11B1P15538 503 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 ADRA2BP18089 450 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 YWHABP31946 246 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 MARCKSL1P49006 195 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms