RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 AGPAT1Q99943 283 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 EFCAB8A8MWE9 144 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 B4GALT4O60513 344 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 DUSP11O75319 330 aaKnown RBP19.23■□□□□ 0.67
RAB39A-201ENST00000320578 IL18RAPO95256 599 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 H2AFZP0C0S5 128 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
RAB39A-201ENST00000320578 SMIM10L2AP0DMW4 78 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 SMIM10L2BP0DMW5 78 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 TNFAIP3P21580 790 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 ADAM17P78536 824 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 LACTBP83111 547 aaPredicted RBP19.23■□□□□ 0.67
RAB39A-201ENST00000320578 MFSD10Q14728 455 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 IFI16Q16666 785 aaKnown RBP19.23■□□□□ 0.67
RAB39A-201ENST00000320578 NFRKBQ6P4R8 1299 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 H2AFVQ71UI9 128 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 MNS1Q8NEH6 495 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 LNX1Q8TBB1 728 aaPredicted RBP19.23■□□□□ 0.67
RAB39A-201ENST00000320578 LMBR1Q8WVP7 490 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 ZBTB10Q96DT7 871 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 C1orf112Q9NSG2 853 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 VNN1O95497 513 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 IQCF3P0C7M6 154 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 PSMC4P43686 418 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 PSEN2P49810 448 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 ZNF568Q3ZCX4 644 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 MFSD14CQ5VZR4 134 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 ZBTB33Q86T24 672 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 CALR3Q96L12 384 aaKnown RBP19.23■□□□□ 0.67
RAB39A-201ENST00000320578 CFHR5Q9BXR6 569 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 CDT1Q9H211 546 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 PCDHGC5Q9Y5F6 944 aa19.23■□□□□ 0.67
RAB39A-201ENST00000320578 PTPRJQ12913 1337 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 DUOXA2Q1HG44 320 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 KAT5Q92993 513 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 CARD6Q9BX69 1037 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 SETD4Q9NVD3 440 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 SALL4Q9UJQ4 1053 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 TSKSQ9UJT2 592 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 SAR1BQ9Y6B6 198 aa19.22■□□□□ 0.67
RAB39A-201ENST00000320578 B4GALT5O43286 388 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 TADA3O75528 432 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 MOCS3O95396 460 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 VTNP04004 478 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 CLTAP09496 248 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 GZMAP12544 262 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 TBXAS1P24557 533 aaPredicted RBP19.21■□□□□ 0.67
RAB39A-201ENST00000320578 HOXC8P31273 242 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 TNFSF9P41273 254 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 BIRC3Q13489 604 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 EEF1DP3Q658K8 133 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 CYP4F22Q6NT55 531 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 GLYCTKQ8IVS8 523 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 U2AF1L4Q8WU68 220 aaKnown RBP19.21■□□□□ 0.67
RAB39A-201ENST00000320578 NLRP7Q8WX94 980 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 TATDN2Q93075 761 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 FAXDC2Q96IV6 333 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 ADAMTS10Q9H324 1103 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 NOCTQ9UK39 431 aaKnown RBP19.21■□□□□ 0.67
RAB39A-201ENST00000320578 CAPN6Q9Y6Q1 641 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 TMEM253P0C7T8 217 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 HARSP12081 509 aaKnown RBP19.21■□□□□ 0.67
RAB39A-201ENST00000320578 CYBAP13498 195 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 GJA9P57773 515 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 BPIFB4P59827 614 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 TCEAL1Q15170 157 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 FSCN1Q16658 493 aaKnown RBP19.21■□□□□ 0.67
RAB39A-201ENST00000320578 EPS8L1Q8TE68 723 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 PACSIN1Q9BY11 444 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 PDZD7Q9H5P4 517 aa19.21■□□□□ 0.67
RAB39A-201ENST00000320578 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 ATP1A1P05023 1023 aaKnown RBP19.2■□□□□ 0.66
RAB39A-201ENST00000320578 GNAT1P11488 350 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 NCOA4Q13772 614 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 TMEM132AQ24JP5 1023 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
RAB39A-201ENST00000320578 ZNF677Q86XU0 584 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 OR5B17Q8NGF7 314 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 ANKRD7Q92527 254 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
RAB39A-201ENST00000320578 UPF3AQ9H1J1 476 aaKnown RBP19.2■□□□□ 0.66
RAB39A-201ENST00000320578 ISCUQ9H1K1 167 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 ASB7Q9H672 318 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 RPF1Q9H9Y2 349 aaKnown RBP19.2■□□□□ 0.66
RAB39A-201ENST00000320578 CNTN6Q9UQ52 1028 aa19.2■□□□□ 0.66
RAB39A-201ENST00000320578 EVPLQ92817 2033 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 GPR25O00155 361 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 GPR32O75388 356 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 ARF4P18085 180 aaPredicted RBP19.19■□□□□ 0.66
RAB39A-201ENST00000320578 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
RAB39A-201ENST00000320578 LMBRD2Q68DH5 695 aaPredicted RBP19.19■□□□□ 0.66
RAB39A-201ENST00000320578 NME8Q8N427 588 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 TRPV1Q8NER1 839 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 UBE2Q2Q8WVN8 375 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 MGAMO43451 1857 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 NCANO14594 1321 aa19.19■□□□□ 0.66
RAB39A-201ENST00000320578 ANKRD62A6NC57 917 aa19.18■□□□□ 0.66
RAB39A-201ENST00000320578 CYP26A1O43174 497 aa19.18■□□□□ 0.66
RAB39A-201ENST00000320578 TSPAN1O60635 241 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms