RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 TMEM132DQ14C87 1099 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 CBWD6Q4V339 395 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 CBWD3Q5JTY5 395 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 MIIPQ5JXC2 388 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 CBWD5Q5RIA9 395 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 HYIQ5T013 277 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 KCTD16Q68DU8 428 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 CPB2Q96IY4 423 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 MED15Q96RN5 788 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 IQCGQ9H095 443 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 PORCNQ9H237 461 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 EHD2Q9NZN4 543 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 STIM2Q9P246 746 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SCINQ9Y6U3 715 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 ASTN1O14525 1302 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 MYPNQ86TC9 1320 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 PASKQ96RG2 1323 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 C10orf71Q711Q0 1435 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 RNF225M0QZC1 329 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 LPXNO60711 386 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SNRPFP62306 86 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SREBF2Q12772 1141 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 DENND2CQ68D51 928 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 ZNF571Q7Z3V5 609 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 ARFGAP2Q8N6H7 521 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 REPS2Q8NFH8 660 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 LENG9Q96B70 501 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 TMEM117Q9H0C3 514 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 DNAJC17Q9NVM6 304 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 RSPH14Q9UHP6 348 aa9.93□□□□□ -0.82
TMEM39A-201ENST00000319172 SPATA31C2B4DYI2 1134 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ZRANB2O95218 330 aaKnown RBP eCLIP9.92□□□□□ -0.827e-6■■■■■ 37.3
TMEM39A-201ENST00000319172 SGPL1O95470 568 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 NPTXRO95502 500 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ATF2P15336 505 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 GARTP22102 1010 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 HOXD10P28358 340 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ADORA2BP29275 332 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 DLG4P78352 724 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 CYP24A1Q07973 514 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ORC1Q13415 861 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 MMS22LQ6ZRQ5 1243 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 OTUD6BQ8N6M0 293 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SPATA4Q8NEY3 305 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 VPS37BQ9H9H4 285 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP8A1Q9Y2Q0 1164 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SGK1O00141 431 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 P4HA2O15460 535 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 RTN2O75298 545 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP2A2P16615 1042 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 AP3M2P53677 418 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SGSM1Q2NKQ1 1148 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 HSDL1Q3SXM5 330 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 CASC4Q6P4E1 433 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 RSRC2Q7L4I2 434 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 METTL23Q86XA0 190 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 NME8Q8N427 588 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ASAP3Q8TDY4 903 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 A6NJR5 290 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP6R3Q5H9R7 873 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SIX6OS1Q8N1H7 587 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 KCTD6Q8NC69 237 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 COG1Q8WTW3 980 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SLC20A1Q8WUM9 679 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 HSPH1Q92598 858 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SYN2Q92777 582 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 TATDN2Q93075 761 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 OSMRQ99650 979 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SENP7Q9BQF6 1050 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 KCTD10Q9H3F6 313 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 ABHD16BQ9H3Z7 469 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 PRKAG2Q9UGJ0 569 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SIK3Q9Y2K2 1263 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 SNX24Q9Y343 169 aa9.92□□□□□ -0.82
TMEM39A-201ENST00000319172 MIF4GDA9UHW6 222 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 F8VZ95 297 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 TGFB1I1O43294 461 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 GAS2O43903 313 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ECEL1O95672 775 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 TFRCP02786 760 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ITGB3P05106 788 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 GJB1P08034 283 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PDGFRBP09619 1106 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP1A2P50993 1020 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 DR1Q01658 176 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ZNF484Q5JVG2 852 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 MAP7D3Q8IWC1 876 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 NOA1Q8NC60 698 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 GRK7Q8WTQ7 553 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 THAP2Q9H0W7 228 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 STMN4Q9H169 189 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 HSD3B7Q9H2F3 369 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PCDHB2Q9Y5E7 798 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 HMGB1P1B2RPK0 211 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 BTBD19C9JJ37 291 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms