RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 MARK3P27448 753 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ECE1P42892 770 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ITIH3Q06033 890 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 MOB2Q70IA6 237 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 FAM13CQ8NE31 585 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 MKL1Q969V6 931 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 EIF2AQ9BY44 585 aaKnown RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 CIB2O75838 187 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 SLC1A4P43007 532 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 NEK2P51955 445 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 RTP1P59025 263 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 BNIP1Q12981 228 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 DCTN2Q13561 401 aaKnown RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 GRM4Q14833 912 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 C6orf118Q5T5N4 469 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 USP17L2Q6R6M4 530 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ANKRD13AQ8IZ07 590 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 FRMD4BQ9Y2L6 1034 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 PCDHB6Q9Y5E3 794 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 F5H6K3 240 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 CELF2O95319 508 aaKnown RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 GOLGA8HP0CJ92 632 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ATP6V1B1P15313 513 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 INHBCP55103 352 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 KLRC3Q07444 240 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 VGLL4Q14135 290 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 VWA3BQ502W6 1294 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 OR52E8Q6IFG1 317 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 IZUMO2Q6UXV1 221 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 LRRC74BQ6ZQY2 392 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 CMTR1Q8N1G2 835 aaKnown RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 MREGQ8N565 214 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 SMYD1Q8NB12 490 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 MRRFQ96E11 262 aaKnown RBP12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 PBKQ96KB5 322 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 OSBPL10Q9BXB5 764 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 ARHGEF3Q9NR81 526 aa12.43□□□□□ -0.42
LDLRAD3-201ENST00000315571 PGM3O95394 542 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 PTPRAP18433 802 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 SIAH1Q8IUQ4 282 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 C2orf69Q8N8R5 385 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 MAP3K14Q99558 947 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 CELF4Q9BZC1 486 aaKnown RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 GPCPD1Q9NPB8 672 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 LIMA1Q9UHB6 759 aaKnown RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 ZNF148Q9UQR1 794 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 RABGAP1Q9Y3P9 1069 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 NUB1Q9Y5A7 615 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 LGALS16A8MUM7 142 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 F8VZ95 297 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 UBE2Q2LH0YL09 131 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 TTI1O43156 1089 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 TRPA1O75762 1119 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 ASPRV1Q53RT3 343 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 NOL9Q5SY16 702 aaKnown RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 MARK2Q7KZI7 788 aaKnown RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 RASSF3Q86WH2 238 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 MED15Q96RN5 788 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 ELP3Q9H9T3 547 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 SNX24Q9Y343 169 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 UNC5CO95185 931 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 CBX6O95503 412 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 NDUFB10O96000 172 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 LYNP07948 512 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 PHBP35232 272 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 SERPINB8P50452 374 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 KCNMA1Q12791 1236 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 SPP2Q13103 211 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMTC3Q6ZXV5 915 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 TBC1D10AQ9BXI6 508 aa12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 GBA2Q9HCG7 927 aaPredicted RBP12.42□□□□□ -0.42
LDLRAD3-201ENST00000315571 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PEX11AO75192 247 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PLEKHA8P1O95397 391 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 ASLP04424 464 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 FLT3P36888 993 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 NR5A1Q13285 461 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 MED21Q13503 144 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 RAPGEF1Q13905 1077 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 CDKAL1Q5VV42 579 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PEX26Q7Z412 305 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 DCAF4Q8WV16 495 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 TLR10Q9BXR5 811 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 GOLPH3Q9H4A6 298 aa12.41□□□□□ -0.42
LDLRAD3-201ENST00000315571 PALMDQ9NP74 551 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms