RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 C3orf20Q8ND61 904 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 ZNF668Q96K58 619 aaPredicted RBP13.69□□□□□ -0.22
VANGL1-201ENST00000310260 PPP1R16BQ96T49 567 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
VANGL1-201ENST00000310260 FAM49AQ9H0Q0 323 aaPredicted RBP13.69□□□□□ -0.22
VANGL1-201ENST00000310260 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
VANGL1-201ENST00000310260 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 TREHO43280 583 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 CAPN15O75808 1086 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
VANGL1-201ENST00000310260 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
VANGL1-201ENST00000310260 E2F5Q15329 346 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 RAD54LQ92698 747 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 ZHX3Q9H4I2 956 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 EXOC1Q9NV70 894 aa13.68□□□□□ -0.22
VANGL1-201ENST00000310260 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 ARVCFO00192 962 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 NCK2O43639 380 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 HEXIM1O94992 359 aaKnown RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 EYA4O95677 639 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 RARRES1P49788 294 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 XRCC4Q13426 336 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 SPA17Q15506 151 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 NAALADL2Q58DX5 795 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 HYIQ5T013 277 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 DYMQ7RTS9 669 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 LARP4BQ92615 738 aaKnown RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 PPANQ9NQ55 473 aaKnown RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 ANKEF1Q9NU02 776 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 SLC12A6Q9UHW9 1150 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 LYPLA2O95372 231 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 SLC8A1P32418 973 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 SCTRP47872 440 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 TMEM62Q0P6H9 643 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 QPCTQ16769 361 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 ZNF484Q5JVG2 852 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 MARCH8Q5T0T0 291 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 ANKLE1Q8NAG6 615 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 RUSC1Q9BVN2 902 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 NIFKQ9BYG3 293 aaKnown RBP13.67□□□□□ -0.22
VANGL1-201ENST00000310260 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 NRCAMQ92823 1304 aa13.67□□□□□ -0.22
VANGL1-201ENST00000310260 SFI1A8K8P3 1242 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 GNAT1P11488 350 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 CYP2C9P11712 490 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
VANGL1-201ENST00000310260 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 CLCN3P51790 818 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 GUCY2DQ02846 1103 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 IFFO1Q0D2I5 559 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TRIM60Q495X7 471 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 FAM102BQ5T8I3 360 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 RUFY4Q6ZNE9 571 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 CCDC42Q96M95 316 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 EPB41L5Q9HCM4 733 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 GPRC5CQ9NQ84 441 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 GTF2IRD1Q9UHL9 959 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 A0A1W2PQJ5 194 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 GMNCA6NCL1 334 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 MGRN1O60291 552 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 B4GALT4O60513 344 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 SLC12A3P55017 1021 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TLE2Q04725 743 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 LACTB2Q53H82 288 aaPredicted RBP13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TTI2Q6NXR4 508 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 CASKIN2Q8WXE0 1202 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 MS4A14Q96JA4 679 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TUBGCP2Q9BSJ2 902 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 TMBIM4Q9HC24 238 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 STK17AQ9UEE5 414 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 DBR1Q9UK59 544 aaKnown RBP13.66□□□□□ -0.22
VANGL1-201ENST00000310260 PLAAQ9Y263 795 aa13.66□□□□□ -0.22
VANGL1-201ENST00000310260 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
VANGL1-201ENST00000310260 KAT6AQ92794 2004 aa13.65□□□□□ -0.22
VANGL1-201ENST00000310260 C5orf60A6NFR6 353 aa13.65□□□□□ -0.22
VANGL1-201ENST00000310260 LCA5LO95447 670 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms