RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 STARD7Q9NQZ5 370 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ABCF3Q9NUQ8 709 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TAB2Q9NYJ8 693 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ANO9A1A5B4 782 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TTC36A6NLP5 189 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 KCNQ2O43526 872 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SMIM24O75264 130 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 OCM2P0CE71 109 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 OCMP0CE72 109 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NDUFA8P51970 172 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MESDQ14696 234 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TDRD10Q5VZ19 366 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 LDHDQ86WU2 507 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DEPDC1BQ8WUY9 529 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DDX17Q92841 729 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF518BQ9C0D4 1074 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 LSG1Q9H089 658 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 INTS9Q9NV88 658 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHA7Q9UN72 937 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC189A1A4V9 331 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CAND2O75155 1236 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 LRRN2O75325 713 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ALDH2P05091 517 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ATICP31939 592 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 HADHAP40939 763 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GUCA1AP43080 201 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PSEN1P49768 467 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ATP2C1P98194 919 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GABPB1Q06547 395 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SNX1Q13596 522 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SLC45A4Q5BKX6 768 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF410Q86VK4 478 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 UNC45BQ8IWX7 931 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SUGP1Q8IWZ8 645 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF34Q8IZ26 560 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 KCNB2Q92953 911 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RMDN1Q96DB5 314 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CHMP6Q96FZ7 201 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MRPL48Q96GC5 212 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PRMT6Q96LA8 375 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZMYND12Q9H0C1 365 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CBX8Q9HC52 389 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHB2Q9Y5E7 798 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GAKO14976 1311 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TNS2Q63HR2 1409 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MYH1P12882 1939 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 AKAP12Q02952 1782 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PRAMEF22A3QJZ6 481 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GRID2IPA4D2P6 1211 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 C3orf70A6NLC5 250 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NPM3O75607 178 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CAPN15O75808 1086 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RPA1P27694 616 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 BASP1P80723 227 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PSMD6Q15008 389 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 AASDHQ4L235 1098 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ACAD11Q709F0 780 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 LCORLQ8N3X6 602 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SEPT8Q92599 483 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GPKOWQ92917 476 aaPredicted RBP eCLIP3.37□□□□□ -1.874e-7■■□□□ 14.1
CLOCK-201ENST00000309964 PRPF18Q99633 342 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MTG1Q9BT17 334 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TMX1Q9H3N1 280 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SEC31BQ9NQW1 1179 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TXLNGQ9NUQ3 528 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CHCHD3Q9NX63 227 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 STX18Q9P2W9 335 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DLG5Q8TDM6 1919 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PRRC2BQ5JSZ5 2229 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 POTEB3A0JP26 581 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 A8MXQ7 604 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CSF1RP07333 972 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RHOXF2BP0C7M4 288 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 AKR1A1P14550 325 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RRM1P23921 792 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PRDX5P30044 214 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 INPP5BP32019 993 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CHRNA3P32297 505 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GCKP35557 465 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 POTEBQ6S5H4 581 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MMS22LQ6ZRQ5 1243 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CATSPER1Q8NEC5 780 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 OR9Q1Q8NGQ5 310 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CXorf38Q8TB03 319 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MIPOL1Q8TD10 442 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RHOXF2Q9BQY4 288 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DCLK3Q9C098 648 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NEUROG2Q9H2A3 272 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GGA3Q9NZ52 723 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GABBR1Q9UBS5 961 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CDC23Q9UJX2 597 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC88CQ9P219 2028 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SALL1Q9NSC2 1324 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 EXOC1LA0A1B0GW35 172 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SUPT3HO75486 399 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ANXA9O76027 345 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SNUPNO95149 360 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GDF11O95390 407 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms