RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TTC26A0AVF1 554 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 MEIS3P2A8K0S8 358 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 TISP43B9A030 160 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 FGFR1OPO95684 399 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 RB1P06400 928 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 NR2F2P24468 414 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 ACOT2P49753 483 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 FKBP3Q00688 224 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 ENOX2Q16206 610 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 SNRNP35Q16560 246 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 SLC10A6Q3KNW5 377 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 HABP4Q5JVS0 413 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 UROC1Q96N76 676 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 TGS1Q96RS0 853 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 MKNK1Q9BUB5 465 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 RBAKQ9NYW8 714 aaPredicted RBP19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 PCDHB12Q9Y5F1 795 aa19.46■□□□□ 0.71
SSSCA1-201ENST00000309328 LINC01553A4QN01 128 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 PPP1R3GB7ZBB8 358 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 CETN3O15182 167 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 CLIC2O15247 247 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 CXCL8P10145 99 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 CYP3A5P20815 502 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 BMP6P22004 513 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 ERCC5P28715 1186 aaPredicted RBP19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 ALDH7A1P49419 539 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 SCNN1GP51170 649 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 CYP2J2P51589 502 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 PAN2Q504Q3 1202 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 SPOUT1Q5T280 376 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 GSTCDQ8NEC7 633 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 ZFP42Q96MM3 310 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 SEMA6BQ9H3T3 888 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 PCIF1Q9H4Z3 704 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 ANO10Q9NW15 660 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 TMEM63CQ9P1W3 806 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 YBX2Q9Y2T7 364 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 MRPL42Q9Y6G3 142 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 TRIOBPQ9H2D6 2365 aa19.45■□□□□ 0.7
SSSCA1-201ENST00000309328 SMIM28A0A1B0GU29 152 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 C5orf67F2Z3F1 127 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 PAX3P23760 479 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 PBX2P40425 430 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 ERVK-21P61565 698 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 TAP1Q03518 808 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 DSC1Q08554 894 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 ADAM9Q13443 819 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 TUSC3Q13454 348 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 STX1AQ16623 288 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 ISM2Q6H9L7 571 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 CRELD2Q6UXH1 353 aaPredicted RBP19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 TMEM192Q8IY95 271 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 CACTINQ8WUQ7 758 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 NELFBQ8WX92 580 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 SAAL1Q96ER3 474 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 DDX27Q96GQ7 796 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 CEP63Q96MT8 703 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 ZNF558Q96NG5 402 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 PPP1R10Q96QC0 940 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 C11orf84Q9BUA3 381 aaPredicted RBP19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 NKX2-4Q9H2Z4 354 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 KLK14Q9P0G3 267 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 RWDD2AQ9UIY3 292 aa19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 UBQLN1Q9UMX0 589 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-201ENST00000309328 LCHNA4D1U4 455 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 PTGESO14684 152 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 SLC16A3O15427 465 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 POMCP01189 267 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 ALDH2P05091 517 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 EPB41P11171 864 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 RPL9P32969 192 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 PSMC2P35998 433 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 TNFSF9P41273 254 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 GATMP50440 423 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 AP3M2P53677 418 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 KLHL10Q6JEL2 608 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 INTS8Q75QN2 995 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 ZC3H3Q8IXZ2 948 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 FNBP1Q96RU3 617 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 IKZF4Q9H2S9 585 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 CWH43Q9H720 699 aa19.43■□□□□ 0.7
SSSCA1-201ENST00000309328 LACTBL1A8MY62 500 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 ZC3H11AO75152 810 aaKnown RBP eCLIP19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 GNA14O95837 355 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 CCDC192P0DO97 292 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 MYOGP15173 224 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 BMPR1AP36894 532 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 TMEM132DQ14C87 1099 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 PSMD6Q15008 389 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 SEZ6Q53EL9 994 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 ZBTB41Q5SVQ8 909 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 LRRC55Q6ZSA7 311 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 COLGALT2Q8IYK4 626 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 BEST2Q8NFU1 509 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 KIF12Q96FN5 646 aa19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 NAT10Q9H0A0 1025 aaKnown RBP19.42■□□□□ 0.7
SSSCA1-201ENST00000309328 CTNND2Q9UQB3 1225 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms