RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ZBED1O96006 694 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 TAL1P17542 331 aaPredicted RBP14.1□□□□□ -0.15
DDX54-201ENST00000306014 HNRNPH3P31942 346 aaKnown RBP14.1□□□□□ -0.15
DDX54-201ENST00000306014 PTENP60484 403 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 ENOSF1Q7L5Y1 443 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 KIRREL3Q8IZU9 778 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 PPM1NQ8N819 430 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 CYP2W1Q8TAV3 490 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 OSBPL8Q9BZF1 889 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 IP6K2Q9UHH9 426 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 CHD2O14647 1828 aaKnown RBP14.1□□□□□ -0.15
DDX54-201ENST00000306014 MYBL1P10243 752 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 CHRNA5P30532 468 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 SLC1A1P43005 524 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 DNAJC3Q13217 504 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 MAP3K21Q5TCX8 1036 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 NT5DC3Q86UY8 548 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 KIAA1586Q9HCI6 787 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 NEU2Q9Y3R4 380 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 A0A0A6YYK5 440 aaPredicted RBP14.1□□□□□ -0.15
DDX54-201ENST00000306014 RARGP13631 454 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 GRIK5Q16478 980 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 ANKRD20A8PQ5CZ79 823 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 PLA2G4FQ68DD2 849 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 NCAPG2Q86XI2 1143 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 MIPOL1Q8TD10 442 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 MAGED2Q9UNF1 606 aaPredicted RBP14.1□□□□□ -0.15
DDX54-201ENST00000306014 MYO3BQ8WXR4 1341 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 MED7O43513 233 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 CALB1P05937 261 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 ACOT2P49753 483 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 CASP5P51878 434 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 HIF1AQ16665 826 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 FAM160B1Q5W0V3 765 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 RHPN2Q8IUC4 686 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 ATP11CQ8NB49 1132 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 ATP8B4Q8TF62 1192 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 CBWD1Q9BRT8 395 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 TRAF3IP3Q9Y228 551 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 HEY1Q9Y5J3 304 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 NFAT5O94916 1531 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 RALAP11233 206 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 IFI35P80217 286 aaPredicted RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 PPP6R3Q5H9R7 873 aaPredicted RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 SYCP2LQ5T4T6 812 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX54-201ENST00000306014 CRAMP1Q96RY5 1269 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 RBAKQ9NYW8 714 aaPredicted RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 KCND2Q9NZV8 630 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 G3BP2Q9UN86 482 aaKnown RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 USH1CQ9Y6N9 552 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 LPXNO60711 386 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 LDHAP00338 332 aaKnown RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 MARK3P27448 753 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 MAGEA4P43358 317 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 KCNA1Q09470 495 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 SYDE1Q6ZW31 735 aaPredicted RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 FAM149B1Q96BN6 582 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
DDX54-201ENST00000306014 SLC9A2Q9UBY0 812 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 POLLQ9UGP5 575 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 GTF3C4Q9UKN8 822 aa14.09□□□□□ -0.15
DDX54-201ENST00000306014 LMNAP02545 664 aaKnown RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 COPS2P61201 443 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 EAPPQ56P03 285 aaPredicted RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 ATG16L1Q676U5 607 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 HHIPL2Q6UWX4 724 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 CRLF3Q8IUI8 442 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 SUGP1Q8IWZ8 645 aaKnown RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 C7orf31Q8N865 590 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 CCNYQ8ND76 341 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 HEXIM2Q96MH2 286 aaKnown RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 KIFC3Q9BVG8 833 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 ANGPTL2Q9UKU9 493 aa14.08□□□□□ -0.15
DDX54-201ENST00000306014 AGO2Q9UKV8 859 aaKnown RBP14.08□□□□□ -0.15
DDX54-201ENST00000306014 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 TRAPPC3O43617 180 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 KIF1CO43896 1103 aaKnown RBP14.08□□□□□ -0.16
DDX54-201ENST00000306014 UBOX5O94941 541 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 GYS1P13807 737 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 NCF2P19878 526 aaPredicted RBP14.08□□□□□ -0.16
DDX54-201ENST00000306014 CCND1P24385 295 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 ITGB3BPQ13352 177 aaPredicted RBP14.08□□□□□ -0.16
DDX54-201ENST00000306014 MAP7Q14244 749 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 PCGF5Q86SE9 256 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 TTC13Q8NBP0 860 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 DNAJC19Q96DA6 116 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 SCYL1Q96KG9 808 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 NLRP4Q96MN2 994 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 PPP1R16BQ96T49 567 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 POLR3FQ9H1D9 316 aaPredicted RBP14.08□□□□□ -0.16
DDX54-201ENST00000306014 PARVAQ9NVD7 372 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms