RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 MTBPQ96DY7 904 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 KCNK16Q96T55 309 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 EPB41L4AQ9HCS5 686 aaPredicted RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 TBX3O15119 743 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 MAN1A2O60476 641 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 ZFXP17010 805 aaPredicted RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 EIF3EP60228 445 aaKnown RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 HERVK_113P62684 666 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 MAPK6Q16659 721 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 CDKAL1Q5VV42 579 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 C4orf50Q6ZRC1 276 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 OR6B3Q8NGW1 331 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 NSL1Q96IY1 281 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 DLC1Q96QB1 1528 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 PLEKP08567 350 aaPredicted RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 COILP38432 576 aaPredicted RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 TIPINQ9BVW5 301 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 BFARQ9NZS9 450 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 PDP2Q9P2J9 529 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 ATP8B3O60423 1300 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 E2F6O75461 281 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 KLHL2O95198 593 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 CYP19A1P11511 503 aaPredicted RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 ITGA8P53708 1063 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 TNFAIP2Q03169 654 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 STX3Q13277 289 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
COL3A1-201ENST00000304636 EXT2Q93063 718 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 SENP7Q9BQF6 1050 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF711Q9Y462 761 aa13.57□□□□□ -0.24
COL3A1-201ENST00000304636 M0QYV0 167 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 SMAPO00193 183 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 TTC8Q8TAM2 541 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 RMDN3Q96TC7 470 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 KCND2Q9NZV8 630 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 CAPN6Q9Y6Q1 641 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 FNTAP49354 379 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 FAM167AQ96KS9 214 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 NLRP4Q96MN2 994 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 MTRQ99707 1265 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 SPAG6O75602 509 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF189O75820 626 aaPredicted RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 IL10P22301 178 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 B2RBV5 119 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 O00370 1275 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 ANP32DO95626 131 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 MAPK7Q13164 816 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 LVRNQ6Q4G3 990 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 THTPAQ9BU02 230 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 SCHIP1Q9P0W5 487 aaPredicted RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 STX18Q9P2W9 335 aaKnown RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 MAGEA13PA6NCF6 341 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 CSF1RP07333 972 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 CRKP46108 304 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 SERPINB9P50453 376 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 CDH6P55285 790 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF200P98182 395 aaPredicted RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 MDH1BQ5I0G3 518 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 PBXIP1Q96AQ6 731 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
COL3A1-201ENST00000304636 DUSP10Q9Y6W6 482 aa13.56□□□□□ -0.24
COL3A1-201ENST00000304636 ASNSP08243 561 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 CYTH1Q15438 398 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 SLC30A5Q8TAD4 765 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 NCLNQ969V3 563 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 F5H6K3 240 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 APOL1O14791 398 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 EIF3DO15371 548 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 KLRC3Q07444 240 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 RBAKQ9NYW8 714 aaPredicted RBP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 GHRP10912 638 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 FAM47CQ5HY64 1035 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 LRRN4CLQ8ND94 238 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 INPP5FQ9Y2H2 1132 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 MYBP10242 640 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms