RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 TMEM59LQ9UK28 342 aa20.9■□□□□ 0.94
HOXC4-201ENST00000303406 TTC7AQ9ULT0 858 aaPredicted RBP20.9■□□□□ 0.94
HOXC4-201ENST00000303406 ZSWIM8A7E2V4 1837 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 TMCO5BA8MYB1 307 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 KCNK3O14649 394 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 FAM189A1O60320 539 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 MARK3P27448 753 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 ACOT2P49753 483 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 MCL1Q07820 350 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 CCNI2Q6ZMN8 369 aaPredicted RBP20.89■□□□□ 0.94
HOXC4-201ENST00000303406 DNAAF5Q86Y56 855 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 USP38Q8NB14 1042 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 DDX1Q92499 740 aaKnown RBP20.89■□□□□ 0.94
HOXC4-201ENST00000303406 TATDN2Q93075 761 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 ARHGEF26Q96DR7 871 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 PCDHB18PQ96TA0 734 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 KATNBL1Q9H079 304 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 THAP2Q9H0W7 228 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 FZD8Q9H461 694 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 ZNF408Q9H9D4 720 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 PDE11AQ9HCR9 933 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 PDGFCQ9NRA1 345 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 ANKFY1Q9P2R3 1169 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 TRPC6Q9Y210 931 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 IVNS1ABPQ9Y6Y0 642 aa20.89■□□□□ 0.94
HOXC4-201ENST00000303406 OGTO15294 1046 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 MAGEB2O15479 319 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 BUB1BO60566 1050 aaPredicted RBP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 PROZP22891 400 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 PIK3CAP42336 1068 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 MATR3P43243 847 aaKnown RBP eCLIP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 CLUL1Q15846 466 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 SPRYD7Q5W111 196 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 SLC47A2Q86VL8 602 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 IFNLR1Q8IU57 520 aaPredicted RBP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 WDR49Q8IV35 697 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 C2orf69Q8N8R5 385 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 RNF149Q8NC42 400 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 PPTC7Q8NI37 304 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 MS4A14Q96JA4 679 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 VIPAS39Q9H9C1 493 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 RBM12Q9NTZ6 932 aaKnown RBP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 PACSIN2Q9UNF0 486 aaPredicted RBP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 ACKR2O00590 384 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 ABLIM1O14639 778 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 VNN1O95497 513 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 POTEJP0CG39 1038 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 ABCB4P21439 1286 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 TBXAS1P24557 533 aaPredicted RBP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 TNNC1P63316 161 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 IRF5Q13568 498 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 GRB14Q14449 540 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 FAM110CQ1W6H9 321 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 C8orf74Q6P047 294 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 TSHZ1Q6ZSZ6 1077 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 LRRC1Q9BTT6 524 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 SUGCTQ9HAC7 445 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 OSGEPQ9NPF4 335 aa20.88■□□□□ 0.93
HOXC4-201ENST00000303406 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.88■□□□□ 0.93
HOXC4-201ENST00000303406 CCDC188H7C350 402 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 PGRMC1O00264 195 aaKnown RBP20.87■□□□□ 0.93
HOXC4-201ENST00000303406 C22orf31O95567 290 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 LGALS2P05162 132 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 CYP1A2P05177 515 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 WNT7BP56706 349 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 PTENP60484 403 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 POU5F1Q01860 360 aaKnown RBP20.87■□□□□ 0.93
HOXC4-201ENST00000303406 BIRC3Q13489 604 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 FAM187BQ17R55 369 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 PPP1R2P3Q6NXS1 205 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 METTL13Q8N6R0 699 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 LINC01465Q8N7H1 131 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 RPS6KC1Q96S38 1066 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.93
HOXC4-201ENST00000303406 EHD2Q9NZN4 543 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 STIM2Q9P246 746 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 GTF3C4Q9UKN8 822 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 CNTN6Q9UQ52 1028 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 PCDHB2Q9Y5E7 798 aa20.87■□□□□ 0.93
HOXC4-201ENST00000303406 PTPRJQ12913 1337 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 MIF4GDA9UHW6 222 aaKnown RBP20.86■□□□□ 0.93
HOXC4-201ENST00000303406 MMEP08473 750 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 HOXD8P13378 290 aaPredicted RBP20.86■□□□□ 0.93
HOXC4-201ENST00000303406 MAPK4P31152 587 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 GABPB1Q06547 395 aaPredicted RBP20.86■□□□□ 0.93
HOXC4-201ENST00000303406 GPS2Q13227 327 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 CUL2Q13617 745 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 ZBTB41Q5SVQ8 909 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 ACAD10Q6JQN1 1059 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 MPZL3Q6UWV2 235 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 LRRC71Q8N4P6 559 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 CARD9Q9H257 536 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 ACBD3Q9H3P7 528 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 PTPRHQ9HD43 1115 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 RNF216Q9NWF9 866 aaPredicted RBP20.86■□□□□ 0.93
HOXC4-201ENST00000303406 SMARCAL1Q9NZC9 954 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 UVRAGQ9P2Y5 699 aa20.86■□□□□ 0.93
HOXC4-201ENST00000303406 CPSF3Q9UKF6 684 aaKnown RBP20.86■□□□□ 0.93
HOXC4-201ENST00000303406 DDX3YO15523 660 aaKnown RBP20.85■□□□□ 0.93
HOXC4-201ENST00000303406 SRGAP2CP0DJJ0 459 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms