RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 MAP3K14Q99558 947 aa22.27■■□□□ 1.16
LETM1-201ENST00000302787 KCND2Q9NZV8 630 aa22.27■■□□□ 1.16
LETM1-201ENST00000302787 H3BRJ5 948 aa22.27■■□□□ 1.15
LETM1-201ENST00000302787 LONRF1Q17RB8 773 aa22.27■■□□□ 1.15
LETM1-201ENST00000302787 SH2D3AQ9BRG2 576 aa22.27■■□□□ 1.15
LETM1-201ENST00000302787 TYK2P29597 1187 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 OR2W6PQ8NHA6 318 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 ALG13Q9NP73 1137 aaKnown RBP22.26■■□□□ 1.15
LETM1-201ENST00000302787 NDE1Q9NXR1 346 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 TMED1Q13445 227 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 SMIM5Q71RC9 77 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 GGT7Q9UJ14 662 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
LETM1-201ENST00000302787 ALKBH8Q96BT7 664 aaKnown RBP22.26■■□□□ 1.15
LETM1-201ENST00000302787 FXR2P51116 673 aaKnown RBP eCLIP22.26■■□□□ 1.153e-6■■■■□ 25.9
LETM1-201ENST00000302787 SNRNP35Q16560 246 aaKnown RBP22.26■■□□□ 1.15
LETM1-201ENST00000302787 AGBL2Q5U5Z8 902 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 NCLNQ969V3 563 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 KIF12Q96FN5 646 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 MAGEB5Q9BZ81 275 aa22.26■■□□□ 1.15
LETM1-201ENST00000302787 MMP19Q99542 508 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 SENP7Q9BQF6 1050 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 SMG5Q9UPR3 1016 aaKnown RBP22.25■■□□□ 1.15
LETM1-201ENST00000302787 PITPNM2Q9BZ72 1349 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 MCF2P10911 925 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 APOBEC3FQ8IUX4 373 aaKnown RBP22.25■■□□□ 1.15
LETM1-201ENST00000302787 REXO1L1PQ8IX06 675 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 MMGT1Q8N4V1 131 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 RNF149Q8NC42 400 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 RBM15Q96T37 977 aaKnown RBP eCLIP22.25■■□□□ 1.154e-9■■■□□ 16.5
LETM1-201ENST00000302787 CYP4F11Q9HBI6 524 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 FAM8A1Q9UBU6 413 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 DGAT1O75907 488 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 PRKCBP05771 671 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 ZC2HC1CQ53FD0 456 aaPredicted RBP22.25■■□□□ 1.15
LETM1-201ENST00000302787 KCNB2Q92953 911 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 ZBBXA8MT70 800 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 TMEM117Q9H0C3 514 aa22.25■■□□□ 1.15
LETM1-201ENST00000302787 DBR1Q9UK59 544 aaKnown RBP22.25■■□□□ 1.15
LETM1-201ENST00000302787 SPDYE1Q8NFV5 336 aaPredicted RBP22.24■■□□□ 1.15
LETM1-201ENST00000302787 ELF1P32519 619 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 JAMLQ86YT9 394 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 USP38Q8NB14 1042 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 PHF20L1A8MW92 1017 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 TMEM253P0C7T8 217 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 CARSP49589 748 aaKnown RBP22.24■■□□□ 1.15
LETM1-201ENST00000302787 ACOT2P49753 483 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 PTPAQ15257 358 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 TEDDM1Q5T9Z0 273 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 TEX2Q8IWB9 1127 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 ZC3H15Q8WU90 426 aaKnown RBP22.24■■□□□ 1.15
LETM1-201ENST00000302787 RAPGEF5Q92565 580 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 C18orf8Q96DM3 657 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 ZIM3Q96PE6 472 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 ERGIC2Q96RQ1 377 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 YIPF3Q9GZM5 350 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 WWP1Q9H0M0 922 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 ADA2Q9NZK5 511 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 F8W8V4 182 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 GOLGA8RI6L899 631 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 JMJD4Q9H9V9 463 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 SUCLA2Q9P2R7 463 aaPredicted RBP22.24■■□□□ 1.15
LETM1-201ENST00000302787 NTSR2O95665 410 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 EFTUD2Q15029 972 aaKnown RBP eCLIP22.24■■□□□ 1.152e-6■■■■■ 35.3
LETM1-201ENST00000302787 SLC10A5Q5PT55 438 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 EP400NLQ6ZTU2 488 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 XPO6Q96QU8 1125 aaKnown RBP22.24■■□□□ 1.15
LETM1-201ENST00000302787 CRAMP1Q96RY5 1269 aa22.24■■□□□ 1.15
LETM1-201ENST00000302787 CDH16O75309 829 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 STAT5BP51692 787 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 KYAT1Q16773 422 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 FBXO33Q7Z6M2 555 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 SYN2Q92777 582 aaPredicted RBP22.23■■□□□ 1.15
LETM1-201ENST00000302787 EIF3DO15371 548 aaKnown RBP eCLIP22.23■■□□□ 1.15
LETM1-201ENST00000302787 WDR72Q3MJ13 1102 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 TMEM259Q4ZIN3 620 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 CDC42EP5Q6NZY7 148 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 NOP9Q86U38 636 aaKnown RBP22.23■■□□□ 1.15
LETM1-201ENST00000302787 TFR2Q9UP52 801 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 KCNN4O15554 427 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 LRRC23Q53EV4 343 aaPredicted RBP22.23■■□□□ 1.15
LETM1-201ENST00000302787 XKR3Q5GH77 459 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 ZBTB41Q5SVQ8 909 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 KLHDC7AQ5VTJ3 777 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 OSBPL1AQ9BXW6 950 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 HACD3Q9P035 362 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 LCP1P13796 627 aa22.23■■□□□ 1.15
LETM1-201ENST00000302787 CEMIPQ8WUJ3 1361 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 KLRC1P26715 233 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 NDUFAF2Q8N183 169 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 TMEM143Q96AN5 459 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 ARL8AQ96BM9 186 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 OLA1Q9NTK5 396 aaKnown RBP22.22■■□□□ 1.15
LETM1-201ENST00000302787 PRR12Q9ULL5 1215 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 RFX8Q6ZV50 586 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 PID1Q7Z2X4 250 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 ISCUQ9H1K1 167 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 COMTP21964 271 aa22.22■■□□□ 1.15
LETM1-201ENST00000302787 MTMR2Q13614 643 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms