RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 SLC10A6Q3KNW5 377 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 CAVIN1Q6NZI2 390 aaKnown RBP9.62□□□□□ -0.87
VPREB1-201ENST00000302273 FILIP1Q7Z7B0 1213 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 NELFCDQ8IXH7 590 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 GPR65Q8IYL9 337 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 THNSL1Q8IYQ7 743 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 FIBCD1Q8N539 461 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 GLIS3Q8NEA6 775 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 GSTCDQ8NEC7 633 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 TMC2Q8TDI7 906 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 CACTINQ8WUQ7 758 aaKnown RBP9.62□□□□□ -0.87
VPREB1-201ENST00000302273 ZBTB45Q96K62 511 aaPredicted RBP9.62□□□□□ -0.87
VPREB1-201ENST00000302273 MFSD14AQ96MC6 490 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 RPS6KC1Q96S38 1066 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 BPIFA3Q9BQP9 254 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 SEMA6BQ9H3T3 888 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 NXF3Q9H4D5 531 aaKnown RBP9.62□□□□□ -0.87
VPREB1-201ENST00000302273 SNTG2Q9NY99 539 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 TMEM63CQ9P1W3 806 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 PARP2Q9UGN5 583 aa9.62□□□□□ -0.87
VPREB1-201ENST00000302273 EVPLQ92817 2033 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 SMIM28A0A1B0GU29 152 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 NR2F2P24468 414 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 GTF2H1P32780 548 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 MARSP56192 900 aaKnown RBP9.61□□□□□ -0.87
VPREB1-201ENST00000302273 DSC1Q08554 894 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 TUSC3Q13454 348 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 PSMD6Q15008 389 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 ZSCAN23Q3MJ62 389 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 CLLU1OSQ5K130 101 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 TTI2Q6NXR4 508 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 CRELD2Q6UXH1 353 aaPredicted RBP9.61□□□□□ -0.87
VPREB1-201ENST00000302273 BRSK2Q8IWQ3 736 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 ENOX1Q8TC92 643 aaKnown RBP9.61□□□□□ -0.87
VPREB1-201ENST00000302273 FAXDC2Q96IV6 333 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 SNX27Q96L92 541 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
VPREB1-201ENST00000302273 GAD1Q99259 594 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 CBWD1Q9BRT8 395 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 FAM213AQ9BRX8 229 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 HAPLN2Q9GZV7 340 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 RNF39Q9H2S5 420 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 SLC28A3Q9HAS3 691 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 RBAKQ9NYW8 714 aaPredicted RBP9.61□□□□□ -0.87
VPREB1-201ENST00000302273 UBQLN1Q9UMX0 589 aaKnown RBP9.61□□□□□ -0.87
VPREB1-201ENST00000302273 MAPK8IP1Q9UQF2 711 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 PCDHB12Q9Y5F1 795 aa9.61□□□□□ -0.87
VPREB1-201ENST00000302273 ARHGEF37A1IGU5 675 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 TBKBP1A7MCY6 615 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 TMEM189-UBE2V1I3L0A0 370 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 BIN1O00499 593 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 PMM2O15305 246 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 UPP2O95045 317 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 EPB41P11171 864 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 FGFR1P11362 822 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 KRT13P13646 458 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 AKAP5P24588 427 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 LRPAP1P30533 357 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 BMPR1AP36894 532 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 MLH1P40692 756 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 PNPLA4P41247 253 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 ACOT2P49753 483 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 ERVK-21P61565 698 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 UBE3AQ05086 875 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 RNASELQ05823 741 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 ELAVL2Q12926 359 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 SPATA1Q5VX52 437 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 ANKRD40Q6AI12 368 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 PDE12Q6L8Q7 609 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 DCLRE1AQ6PJP8 1040 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 FRMD5Q7Z6J6 570 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 CDR2LQ86X02 465 aaPredicted RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 FAM114A1Q8IWE2 563 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 CSGALNACT2Q8N6G5 542 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 RNF169Q8NCN4 708 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 HELQQ8TDG4 1101 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 NELFBQ8WX92 580 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 ERCC4Q92889 916 aaPredicted RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 PPP1R10Q96QC0 940 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 TGS1Q96RS0 853 aaKnown RBP9.6□□□□□ -0.87
VPREB1-201ENST00000302273 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 PBX4Q9BYU1 374 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 RNF19AQ9NV58 838 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 TBC1D13Q9NVG8 400 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 LZTS1Q9Y250 596 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 USP20Q9Y2K6 914 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 HES2Q9Y543 173 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 TTC3P53804 2025 aa9.6□□□□□ -0.87
VPREB1-201ENST00000302273 LACTBL1A8MY62 500 aa9.59□□□□□ -0.87
VPREB1-201ENST00000302273 TRAPPC3O43617 180 aa9.59□□□□□ -0.87
VPREB1-201ENST00000302273 C1RP00736 705 aa9.59□□□□□ -0.87
VPREB1-201ENST00000302273 CD44P16070 742 aaKnown RBP9.59□□□□□ -0.87
VPREB1-201ENST00000302273 DNAJB2P25686 324 aa9.59□□□□□ -0.87
VPREB1-201ENST00000302273 PLCB3Q01970 1234 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms