RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 L1TD1Q5T7N2 865 aaKnown RBP16.53■□□□□ 0.24
UBXN1-202ENST00000301935 CDCA2Q69YH5 1023 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-202ENST00000301935 PDE12Q6L8Q7 609 aaKnown RBP16.53■□□□□ 0.24
UBXN1-202ENST00000301935 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 ASAP3Q8TDY4 903 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 PBXIP1Q96AQ6 731 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 TSG101Q99816 390 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 DNAJC25Q9H1X3 360 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 TBC1D7Q9P0N9 293 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 RWDD2AQ9UIY3 292 aa16.53■□□□□ 0.24
UBXN1-202ENST00000301935 K7ERI5 159 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 PDXKO00764 312 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 IKBKBO14920 756 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 SLC16A4O15374 487 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 GPR32O75388 356 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 PPP1R37O75864 691 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 SRGAP2BP0DMP2 458 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 CCNE1P24864 410 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 NMT1P30419 496 aaKnown RBP16.52■□□□□ 0.24
UBXN1-202ENST00000301935 PTENP60484 403 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 FAM189BP81408 668 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 STRN3Q13033 797 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 CAPSQ13938 189 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 KCNC3Q14003 757 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 HSP90AA2PQ14568 343 aaPredicted RBP16.52■□□□□ 0.24
UBXN1-202ENST00000301935 DSC3Q14574 896 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 KNOP1Q1ED39 458 aaKnown RBP16.52■□□□□ 0.24
UBXN1-202ENST00000301935 CENPPQ6IPU0 288 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 SRGAP1Q7Z6B7 1085 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 SUGP1Q8IWZ8 645 aaKnown RBP16.52■□□□□ 0.24
UBXN1-202ENST00000301935 RNF149Q8NC42 400 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 ENOX1Q8TC92 643 aaKnown RBP16.52■□□□□ 0.24
UBXN1-202ENST00000301935 SCFD1Q8WVM8 642 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 BSNDQ8WZ55 320 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
UBXN1-202ENST00000301935 BECN2A8MW95 431 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 FGFR1OPO95684 399 aaKnown RBP16.51■□□□□ 0.23
UBXN1-202ENST00000301935 SRGAP2CP0DJJ0 459 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 MYBP10242 640 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 GPC3P51654 580 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 PTPN5P54829 565 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 TPM4P67936 248 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 PLCB3Q01970 1234 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 DRP2Q13474 957 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 IER5LQ5T953 404 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 PLPP4Q5VZY2 271 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 TMEM184AQ6ZMB5 413 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 HS2ST1Q7LGA3 356 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 SMYD4Q8IYR2 804 aaPredicted RBP16.51■□□□□ 0.23
UBXN1-202ENST00000301935 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 HPS3Q969F9 1004 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 PRRX2Q99811 253 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 TCF25Q9BQ70 676 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 GCOM2Q9BZD3 368 aaPredicted RBP16.51■□□□□ 0.23
UBXN1-202ENST00000301935 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
UBXN1-202ENST00000301935 HOXA2O43364 376 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 CALUO43852 315 aaPredicted RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 NLRP11P59045 1033 aaKnown RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 MYL5Q02045 173 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 SIGLEC14Q08ET2 396 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 NCBP1Q09161 790 aaKnown RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 MAPK6Q16659 721 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 FAM187BQ17R55 369 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 EDRF1Q3B7T1 1238 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 ANKRD54Q6NXT1 300 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 C11orf57Q6ZUT1 292 aaPredicted RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 MAP4K3Q8IVH8 894 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 FBXL6Q8N531 539 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 TMEM174Q8WUU8 243 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 NLRP7Q8WX94 980 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 PRIMPOLQ96LW4 560 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 NLRP4Q96MN2 994 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 SCLT1Q96NL6 688 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 CASD1Q96PB1 797 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 PHOX2BQ99453 314 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 ENTPD7Q9NQZ7 604 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 RNF19AQ9NV58 838 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 PRMT7Q9NVM4 692 aaPredicted RBP16.5■□□□□ 0.23
UBXN1-202ENST00000301935 MAPK8IP1Q9UQF2 711 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 TRAF3IP3Q9Y228 551 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
UBXN1-202ENST00000301935 PRPF6O94906 941 aaKnown RBP16.49■□□□□ 0.23
UBXN1-202ENST00000301935 RPL13P26373 211 aaKnown RBP16.49■□□□□ 0.23
UBXN1-202ENST00000301935 PPM1AP35813 382 aa16.49■□□□□ 0.23
UBXN1-202ENST00000301935 CASP5P51878 434 aa16.49■□□□□ 0.23
UBXN1-202ENST00000301935 NFIL3Q16649 462 aa16.49■□□□□ 0.23
UBXN1-202ENST00000301935 TPD52L1Q16890 204 aaPredicted RBP16.49■□□□□ 0.23
UBXN1-202ENST00000301935 ZC2HC1CQ53FD0 456 aaPredicted RBP16.49■□□□□ 0.23
UBXN1-202ENST00000301935 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms