RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PDZD8Q8NEN9 1154 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 TSC22D3Q99576 134 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 WDR46O15213 610 aaKnown RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 PLCB4Q15147 1175 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 LONRF1Q17RB8 773 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 FAM102AQ5T9C2 384 aaPredicted RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 C1orf146Q5VVC0 180 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 KRT80Q6KB66 452 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 DCLK2Q8N568 766 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 CASKIN2Q8WXE0 1202 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 SPDL1Q96EA4 605 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 UPF3AQ9H1J1 476 aaKnown RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 G3BP2Q9UN86 482 aaKnown RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 ZFXP17010 805 aaPredicted RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 NPEPPSP55786 919 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 INTS5Q6P9B9 1019 aaKnown RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 PXDNQ92626 1479 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 LRRC31Q6UY01 552 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 EHD2Q9NZN4 543 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 HSPA8P11142 646 aaKnown RBP20.45■□□□□ 0.86
TSR1-201ENST00000301364 PON1P27169 355 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 P3H1Q32P28 736 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 ZNF677Q86XU0 584 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 ARHGAP20Q9P2F6 1191 aa20.45■□□□□ 0.86
TSR1-201ENST00000301364 FAM47DPA6NHR8 397 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 CDH6P55285 790 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 COPS2P61201 443 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 TRPM8Q7Z2W7 1104 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 RHPN2Q8IUC4 686 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 VCPKMTQ9H867 229 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 DBR1Q9UK59 544 aaKnown RBP20.44■□□□□ 0.86
TSR1-201ENST00000301364 CFAP69A5D8W1 941 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 PAMP19021 973 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 MXRA8Q9BRK3 442 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 DONSONQ9NYP3 566 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 STAP1Q9ULZ2 295 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSR1-201ENST00000301364 TAC1P20366 129 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 FNTAP49354 379 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 RIBC1Q8N443 379 aaPredicted RBP20.44■□□□□ 0.86
TSR1-201ENST00000301364 OSBPL8Q9BZF1 889 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 GOLPH3Q9H4A6 298 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 GTF3C4Q9UKN8 822 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 TRIM33Q9UPN9 1127 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 BEST2Q8NFU1 509 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 CPA5Q8WXQ8 436 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 WWP1Q9H0M0 922 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 AGPAT3Q9NRZ7 376 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 FAM217BQ9NTX9 383 aaPredicted RBP20.44■□□□□ 0.86
TSR1-201ENST00000301364 NEU2Q9Y3R4 380 aa20.44■□□□□ 0.86
TSR1-201ENST00000301364 CLGNO14967 610 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 AP2B1P63010 937 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 CENPCQ03188 943 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 PIGHQ14442 188 aaPredicted RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 ACAD11Q709F0 780 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 C18orf8Q96DM3 657 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 C9orf72Q96LT7 481 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 TMEM117Q9H0C3 514 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 VPS11Q9H270 941 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 PABPC3Q9H361 631 aaKnown RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 DMGDHQ9UI17 866 aaKnown RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 RAD23BP54727 409 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 EIF3EP60228 445 aaKnown RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 NOP14P78316 857 aaKnown RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 LMBRD2Q68DH5 695 aaPredicted RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 ACTRT1Q8TDG2 376 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 PIM2Q9P1W9 311 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 FAM205AQ6ZU69 1335 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 CCT8L1PA6NM43 557 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 KYAT1Q16773 422 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 AGGF1Q8N302 714 aaeCLIP20.43■□□□□ 0.86
TSR1-201ENST00000301364 RNF139Q8WU17 664 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 CPSF3Q9UKF6 684 aaKnown RBP20.43■□□□□ 0.86
TSR1-201ENST00000301364 FIS1Q9Y3D6 152 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 MUTP22033 750 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 CIITAP33076 1130 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 SLC29A2Q14542 456 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 ATP6V1E2Q96A05 226 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 PNMA3Q9UL41 463 aa20.43■□□□□ 0.86
TSR1-201ENST00000301364 H3BQF6 201 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 SMAPO00193 183 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 ZNF189O75820 626 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 KLRK1P26718 216 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 COILP38432 576 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 MAPK7Q13164 816 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 BFARQ9NZS9 450 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 PSMC3IPQ9P2W1 217 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 TRPA1O75762 1119 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 COL23A1Q86Y22 540 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 FAM161BQ96MY7 647 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 TMEM120BA0PK00 339 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 CAVIN3Q969G5 261 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 RPAP3Q9H6T3 665 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 LRRC10BA6NIK2 292 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 SPDYE16A6NNV3 312 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 PI4K2BG5E9Z4 385 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 MSH4O15457 936 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 HUS1O60921 280 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms