RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 RNF10Q8N5U6 811 aaKnown RBP27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 EPS8L1Q8TE68 723 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 ALS2CR12Q96Q35 445 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 JPH2Q9BR39 696 aaPredicted RBP27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 APOBEC3GQ9HC16 384 aaKnown RBP27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 LUC7LQ9NQ29 371 aaKnown RBP27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 SETD4Q9NVD3 440 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 SNX12Q9UMY4 172 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 UMODL1Q5DID0 1318 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 MFAP3P55082 362 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 WHAMMP3Q1A5X7 153 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 EXOC8Q8IYI6 725 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 USP6NLQ92738 828 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 PTPRHQ9HD43 1115 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 GNEQ9Y223 722 aaKnown RBP27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 ACKR2O00590 384 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 LDHAP00338 332 aaKnown RBP27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 H2AFZP0C0S5 128 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 SCP2P22307 547 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 PPFIA1Q13136 1202 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 GRIK4Q16099 956 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 ATF7IP2Q5U623 682 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 H2AFVQ71UI9 128 aa27.66■■■□□ 2.02
SDCCAG3-201ENST00000298537 PROZP22891 400 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 PIK3CAP42336 1068 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 MCL1Q07820 350 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 PDCL2Q8N4E4 241 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 CEP112Q8N8E3 955 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 ARHGEF26Q96DR7 871 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 CGRRF1Q99675 332 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 C2orf40Q9H1Z8 148 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 OSGEPQ9NPF4 335 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 NOCTQ9UK39 431 aaKnown RBP27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 GJD2Q9UKL4 321 aa27.65■■■□□ 2.02
SDCCAG3-201ENST00000298537 KIAA0391O15091 583 aaKnown RBP27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 HOXD8P13378 290 aaPredicted RBP27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 TFDP1Q14186 410 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 DGKDQ16760 1214 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 BRSK2Q8IWQ3 736 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 GOLGA1Q92805 767 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 CPB2Q96IY4 423 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 CHORDC1Q9UHD1 332 aaPredicted RBP27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 ABT1Q9ULW3 272 aaKnown RBP27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 PCDHGC5Q9Y5F6 944 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 HTTP42858 3142 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 NOP2P46087 812 aaKnown RBP27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 TMEM62Q0P6H9 643 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 TMEM132AQ24JP5 1023 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 C10orf76Q5T2E6 689 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 TSHZ1Q6ZSZ6 1077 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 ARHGAP39Q9C0H5 1083 aa27.64■■■□□ 2.02
SDCCAG3-201ENST00000298537 ZNF236Q9UL36 1845 aa27.64■■■□□ 2.01
SDCCAG3-201ENST00000298537 CST3P01034 146 aaPredicted RBP27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 MMEP08473 750 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 ANXA13P27216 316 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 HIC1Q14526 733 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 AMHR2Q16671 573 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 ZNF568Q3ZCX4 644 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 SLC5A4Q9NY91 659 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 CPSF3Q9UKF6 684 aaKnown RBP27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 DAAM1Q9Y4D1 1078 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 TLL2Q9Y6L7 1015 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 FGFR4P22455 802 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 TUBB2AQ13885 445 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 CREG2Q8IUH2 290 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 TXLNBQ8N3L3 684 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 KAT2BQ92831 832 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 OSBPL9Q96SU4 736 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 TUBB2BQ9BVA1 445 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 MTMR12Q9C0I1 747 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 THAP2Q9H0W7 228 aa27.63■■■□□ 2.01
SDCCAG3-201ENST00000298537 CEP350Q5VT06 3117 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 GPR25O00155 361 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 OGTO15294 1046 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 BEX3Q00994 111 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 MPZL3Q6UWV2 235 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 TLK2Q86UE8 772 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 CDT1Q9H211 546 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 RNF216Q9NWF9 866 aaPredicted RBP27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 CTAGE15A4D2H0 777 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 MEFVO15553 781 aaPredicted RBP27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 HOXC6P09630 235 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 CCDC172P0C7W6 258 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 CTAGE8P0CG41 777 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 ENPEPQ07075 957 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 CTAGE6Q86UF2 777 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 CTAGE4Q8IX94 777 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 ZSWIM8A7E2V4 1837 aa27.62■■■□□ 2.01
SDCCAG3-201ENST00000298537 KRT5P13647 590 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 CYP11B1P15538 503 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 FMO1Q01740 532 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 KIAA0319LQ8IZA0 1049 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 LMBR1Q8WVP7 490 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 C1orf112Q9NSG2 853 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 NUB1Q9Y5A7 615 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 A6NJR5 290 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 BTNL10A8MVZ5 291 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 TNPO2O14787 897 aaKnown RBP27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 MAGEB2O15479 319 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 ASAP2O43150 1006 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms