RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ANKRD62A6NC57 917 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CES2O00748 559 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 HLA-DRAP01903 254 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 TXNP10599 105 aaKnown RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CTNNA2P26232 953 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 DYNLT1P63172 113 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 DR1Q01658 176 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 RNF187Q5TA31 235 aaPredicted RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 DPY19L2Q6NUT2 758 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 ASAP3Q8TDY4 903 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 ATG4AQ8WYN0 398 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 C18orf8Q96DM3 657 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 PBKQ96KB5 322 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 KREMEN1Q96MU8 473 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 FAM49AQ9H0Q0 323 aaPredicted RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 TSPYL1Q9H0U9 437 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 VIPAS39Q9H9C1 493 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 KCND2Q9NZV8 630 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 CWC15Q9P013 229 aaKnown RBP9.98□□□□□ -0.81
PRDM9-201ENST00000296682 COG5Q9UP83 839 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 AKT3Q9Y243 479 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 RPTORQ8N122 1335 aa9.98□□□□□ -0.81
PRDM9-201ENST00000296682 RGS20O76081 388 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 SCP2P22307 547 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 HSDL1Q3SXM5 330 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 C10orf76Q5T2E6 689 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 CYFIP2Q96F07 1278 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 EFCC1Q9HA90 598 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 MED4Q9NPJ6 270 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 CALCOCO1Q9P1Z2 691 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 PCDHGC5Q9Y5F6 944 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 SSC5DA1L4H1 1573 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 PTPRFP10586 1907 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 TMEM191BP0C7N4 346 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 CYP11B1P15538 503 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 CYP2C19P33261 490 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 IREB2P48200 963 aaKnown RBP9.97□□□□□ -0.81
PRDM9-201ENST00000296682 AARSP49588 968 aaKnown RBP eCLIP9.97□□□□□ -0.81
PRDM9-201ENST00000296682 ZNF131P52739 623 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 ERVK-9P63128 1117 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 GUCY1A3Q02108 690 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 TCEAL1Q15170 157 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 ALG3Q92685 438 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 PDGFCQ9NRA1 345 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 USP2O75604 605 aaPredicted RBP9.97□□□□□ -0.81
PRDM9-201ENST00000296682 SUPT20HL2P0C7V6 817 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 TNFSF9P41273 254 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 PPATQ06203 517 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 SAMD3Q8N6K7 520 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 CEP120Q8N960 986 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 MGARPQ8TDB4 240 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 GPRASP2Q96D09 838 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 XPNPEP1Q9NQW7 623 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 DBR1Q9UK59 544 aaKnown RBP9.97□□□□□ -0.81
PRDM9-201ENST00000296682 IVNS1ABPQ9Y6Y0 642 aa9.97□□□□□ -0.81
PRDM9-201ENST00000296682 NDUFAB1O14561 156 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 SYF2O95926 243 aaKnown RBP9.96□□□□□ -0.81
PRDM9-201ENST00000296682 OATP04181 439 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 KCNA2P16389 499 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 RRM1P23921 792 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 FLT3P36888 993 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 ZNF280AP59817 542 aaPredicted RBP9.96□□□□□ -0.81
PRDM9-201ENST00000296682 GTF2BQ00403 316 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 SYCP2LQ5T4T6 812 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 C9orf131Q5VYM1 1079 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 MAP1SQ66K74 1059 aaPredicted RBP9.96□□□□□ -0.81
PRDM9-201ENST00000296682 CAPS2Q9BXY5 557 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 SPATC1LQ9H0A9 340 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 ADAM22Q9P0K1 906 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 MTUS1Q9ULD2 1270 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 NOVA2Q9UNW9 492 aaKnown RBP9.96□□□□□ -0.81
PRDM9-201ENST00000296682 UBE4BO95155 1302 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 ZSWIM8A7E2V4 1837 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 TTLL13PA6NNM8 815 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 TMEM253P0C7T8 217 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 UBA1P22314 1058 aaKnown RBP9.96□□□□□ -0.81
PRDM9-201ENST00000296682 MMS22LQ6ZRQ5 1243 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 SESTD1Q86VW0 696 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 OR5B17Q8NGF7 314 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 INPP4AQ96PE3 977 aaPredicted RBP9.96□□□□□ -0.81
PRDM9-201ENST00000296682 DMAC2Q9NW81 257 aa9.96□□□□□ -0.81
PRDM9-201ENST00000296682 TCRBV7S2A1N4TA0A589 114 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.82
PRDM9-201ENST00000296682 MYZAPP0CAP1 466 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 FGFR4P22455 802 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 ACTN2P35609 894 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 CYP24A1Q07973 514 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 PPFIA1Q13136 1202 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 SCARA3Q6AZY7 606 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 DPP9Q86TI2 863 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 PRUNE1Q86TP1 453 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 EPS8L1Q8TE68 723 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 EXOC4Q96A65 974 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 PAIP2Q9BPZ3 127 aaKnown RBP9.96□□□□□ -0.82
PRDM9-201ENST00000296682 MTMR12Q9C0I1 747 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 ASCC2Q9H1I8 757 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms