RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 UHMK1Q8TAS1 419 aaKnown RBP12.65□□□□□ -0.39
RHO-201ENST00000296271 IFT74Q96LB3 600 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 CEP89Q96ST8 783 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 ZSWIM1Q9BR11 485 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 TXNRD2Q9NNW7 524 aa12.65□□□□□ -0.39
RHO-201ENST00000296271 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.39
RHO-201ENST00000296271 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.39
RHO-201ENST00000296271 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 H0YGN5 161 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 MAPK13O15264 365 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 FDX1P10109 184 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 GNPTABQ3T906 1256 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 BRDTQ58F21 947 aaPredicted RBP12.64□□□□□ -0.39
RHO-201ENST00000296271 XRRA1Q6P2D8 792 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 RHOT2Q8IXI1 618 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 MCPH1Q8NEM0 835 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 COPS5Q92905 334 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 CARD9Q9H257 536 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 CALCOCO1Q9P1Z2 691 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 CNOT8Q9UFF9 292 aaKnown RBP12.64□□□□□ -0.39
RHO-201ENST00000296271 ATP8A1Q9Y2Q0 1164 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 NFS1Q9Y697 457 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 NFASCO94856 1347 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 CCDC188H7C350 402 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 MAFGO15525 162 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 SPOPO43791 374 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 FARP2O94887 1054 aaPredicted RBP12.64□□□□□ -0.39
RHO-201ENST00000296271 RRM1P23921 792 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 PTENP60484 403 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 DR1Q01658 176 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 DHX9Q08211 1270 aaKnown RBP12.64□□□□□ -0.39
RHO-201ENST00000296271 Q3C1V9 767 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 C15orf39Q6ZRI6 1047 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 RDM1Q8NG50 284 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 WHAMMQ8TF30 809 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 PSPC1Q8WXF1 523 aaKnown RBP12.64□□□□□ -0.39
RHO-201ENST00000296271 CD101Q93033 1021 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 BCCIPQ9P287 314 aaKnown RBP eCLIP12.64□□□□□ -0.39
RHO-201ENST00000296271 MCM3APO60318 1980 aa12.64□□□□□ -0.39
RHO-201ENST00000296271 GOLGA8KD6RF30 607 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 K7ERI5 159 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 OPA1O60313 960 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 ZEB2O60315 1214 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CSDE1O75534 798 aaKnown RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 C4BPAP04003 597 aaKnown RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 PLTPP55058 493 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CAPSQ13938 189 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 HSDL1Q3SXM5 330 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 LBX2Q6XYB7 198 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 JAMLQ86YT9 394 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 MREGQ8N565 214 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 PORCNQ9H237 461 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 LTBP3Q9NS15 1303 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 MYO1FO00160 1098 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CLDN3O15551 220 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CST3P01034 146 aaPredicted RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 SHBGP04278 402 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 SRGAP2CP0DJJ0 459 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 TCF7P36402 384 aaPredicted RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 PTGIRP43119 386 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 PPFIA1Q13136 1202 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 SNX1Q13596 522 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 TMC3Q7Z5M5 1100 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 DEPTORQ8TB45 409 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 FBXO25Q8TCJ0 367 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 C1orf54Q8WWF1 131 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 MAGOHBQ96A72 148 aaKnown RBP12.63□□□□□ -0.39
RHO-201ENST00000296271 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 FNBP1Q96RU3 617 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 NUB1Q9Y5A7 615 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
RHO-201ENST00000296271 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 EXTL3O43909 919 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 SHOX2O60902 331 aaPredicted RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 GGPS1O95749 300 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 CYP1A2P05177 515 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 RARAP10276 462 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 GARTP22102 1010 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ARL2P36404 184 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 OSTNP61366 133 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 CLEC16AQ2KHT3 1053 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ZACNQ401N2 412 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ZNF394Q53GI3 561 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 GJC2Q5T442 439 aaPredicted RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 TMEM270Q6UE05 265 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ZDHHC24Q6UX98 284 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 CCDC26Q8TAB7 109 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms