RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 CCDC24Q8N4L8 307 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 ATL2Q8NHH9 583 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 BTBD10Q9BSF8 475 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 SPZ1Q9BXG8 430 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 ANAPC4Q9UJX5 808 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 COG5Q9UP83 839 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 LMTK3Q96Q04 1460 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 GOLGA8SH3BPF8 625 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 GOLGA8MH3BSY2 632 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 IL2RBP14784 551 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 CYP4A11Q02928 519 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 PDE1CQ14123 709 aaPredicted RBP10.83□□□□□ -0.68
CLDN1-201ENST00000295522 GIT2Q14161 759 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 LENG1Q96BZ8 264 aaPredicted RBP10.83□□□□□ -0.68
CLDN1-201ENST00000295522 ZNF512BQ96KM6 892 aaPredicted RBP10.83□□□□□ -0.68
CLDN1-201ENST00000295522 OLFM3Q96PB7 478 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 ARHGEF38Q9NXL2 777 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 NINJ2Q9NZG7 142 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
CLDN1-201ENST00000295522 GSC2O15499 205 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 AKAP3O75969 853 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 KITP10721 976 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 VCAM1P19320 739 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SERPINB6P35237 376 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 STAT3P40763 770 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ARFIP2P53365 341 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 AP1B1Q10567 949 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 MED21Q13503 144 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 R3HDM1Q15032 1099 aaKnown RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 PKN2Q16513 984 aaKnown RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 OTOAQ7RTW8 1153 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SLFN11Q7Z7L1 901 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 RFWD2Q8NHY2 731 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SLC20A1Q8WUM9 679 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SIKE1Q9BRV8 207 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 KCNQ5Q9NR82 932 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 TMCO1Q9UM00 188 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 FAF1Q9UNN5 650 aaPredicted RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 TRAF3IP3Q9Y228 551 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 POTEFA5A3E0 1075 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 TRPA1O75762 1119 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 TMEM253P0C7T8 217 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 EPHB1P54762 984 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 CAVIN4Q5BKX8 364 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 POTEEQ6S8J3 1075 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 TTC7BQ86TV6 843 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SFR1Q86XK3 245 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ARHGAP24Q8N264 748 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 TTC17Q96AE7 1141 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 PRR11Q96HE9 360 aaPredicted RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 IWS1Q96ST2 819 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ZBTB1Q9Y2K1 713 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 PCDH11YQ9BZA8 1340 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 DKC1O60832 514 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ITGA2BP08514 1039 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 HARSP12081 509 aaKnown RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SOX5P35711 763 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ADARP55265 1226 aaKnown RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 OCRLQ01968 901 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 CBX3Q13185 183 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 DGKHQ86XP1 1220 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SLC13A5Q86YT5 568 aaPredicted RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ZDHHC14Q8IZN3 488 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 SMC1BQ8NDV3 1235 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ART4Q93070 314 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 NSL1Q96IY1 281 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 ZSWIM1Q9BR11 485 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 MIS12Q9H081 205 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 CHST7Q9NS84 486 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 MARCOQ9UEW3 520 aaPredicted RBP10.82□□□□□ -0.68
CLDN1-201ENST00000295522 STARD13Q9Y3M8 1113 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
CLDN1-201ENST00000295522 BTNL10A8MVZ5 291 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 TBCAO75347 108 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 CCDC15Q0P6D6 951 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 ACAP1Q15027 740 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 MMEL1Q495T6 779 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SLC44A4Q53GD3 710 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 RINLQ6ZS11 566 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SLC26A7Q8TE54 656 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 NAT14Q8WUY8 206 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SNF8Q96H20 258 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 RILPQ96NA2 401 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 TRIM55Q9BYV6 548 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 EBF3Q9H4W6 596 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SH3GLB2Q9NR46 395 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 KRT82Q9NSB4 513 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 TFCP2L1Q9NZI6 479 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 PPARGC1AQ9UBK2 798 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 DDX25Q9UHL0 483 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms