RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 SNX30Q5VWJ9 437 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 FAM178BQ8IXR5 827 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SCYL3Q8IZE3 742 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 VPS52Q8N1B4 723 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 FBXO41Q8TF61 875 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 STMN2Q93045 179 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ELMO3Q96BJ8 720 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 PLVAPQ9BX97 442 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 VPS37BQ9H9H4 285 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 MYO3BQ8WXR4 1341 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 KIAA1551Q9HCM1 1747 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 CFAP69A5D8W1 941 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SPATA31C1P0DKV0 1188 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SKIP12755 728 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 VHLP40337 213 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SERPINB4P48594 390 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 TBC1D9BQ66K14 1250 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 CCDC125Q86Z20 511 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 PPM1KQ8N3J5 372 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 GALNT15Q8N3T1 639 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 PPFIBP2Q8ND30 876 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SLC7A6OSQ96CW6 309 aaPredicted RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 PCDHB18PQ96TA0 734 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 RTFDC1Q9BY42 306 aaPredicted RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 TRABDQ9H4I3 376 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SAYSD1Q9NPB0 183 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ATP8B3O60423 1300 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CAPN9O14815 690 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CYP26A1O43174 497 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 RTN3O95197 1032 aaPredicted RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ACADSP16219 412 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 RPA1P27694 616 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CCDC15Q0P6D6 951 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ACVR2BQ13705 512 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 IZUMO3Q5VZ72 239 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 NLRP9Q7RTR0 991 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SCG3Q8WXD2 468 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 KIFAP3Q92845 792 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SLC5A5Q92911 643 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SMC6Q96SB8 1091 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 NAP1L4Q99733 375 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 DCLRE1BQ9H816 532 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 A0A0G2JND7 137 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ANKRD33BA6NCL7 494 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 E7ENQ6 273 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SLURP2P0DP57 97 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 NT5C2P49902 561 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CACNA2D1P54289 1103 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 YARSP54577 528 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CETN1Q12798 172 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 QRICH1Q2TAL8 776 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 WASHC2DQ5SRD0 308 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 DSTYKQ6XUX3 929 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 B4GALNT2Q8NHY0 566 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 INPP5DQ92835 1189 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SYT11Q9BT88 431 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SUGT1Q9Y2Z0 365 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ZCCHC18P0CG32 403 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 T-ENOLP0DO92 83 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 PPP4CP60510 307 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 DLG4P78352 724 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CUL3Q13618 768 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 KIF22Q14807 665 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 SIX1Q15475 284 aaPredicted RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 PKN2Q16513 984 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ODR4Q5SWX8 454 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 RASIP1Q5U651 963 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 DAB2IPQ5VWQ8 1189 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 FYB2Q5VWT5 728 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 RINT1Q6NUQ1 792 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 ZNF804AQ7Z570 1209 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 TRAIPQ9BWF2 469 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 G3BP2Q9UN86 482 aaKnown RBP10.93□□□□□ -0.66
LMX1A-201ENST00000294816 STARD13Q9Y3M8 1113 aa10.93□□□□□ -0.66
LMX1A-201ENST00000294816 CALCAP01258 141 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 RRM1P23921 792 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 RPA3P35244 121 aaPredicted RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 LBRQ14739 615 aaKnown RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 CYP1B1Q16678 543 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 IRGCQ6NXR0 463 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 CCNJLQ8IV13 435 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 PHC3Q8NDX5 983 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 CYP2W1Q8TAV3 490 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 ZNF333Q96JL9 665 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 RBM15Q96T37 977 aaKnown RBP eCLIP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 EIF2AK1Q9BQI3 630 aaKnown RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 PARVGQ9HBI0 331 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 AGPAT3Q9NRZ7 376 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms