RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 RXFP1Q9HBX9 757 aa6.61□□□□□ -1.35
VCAM1-201ENST00000294728 SENP1Q9P0U3 644 aa6.61□□□□□ -1.35
VCAM1-201ENST00000294728 HERC5Q9UII4 1024 aaKnown RBP6.61□□□□□ -1.35
VCAM1-201ENST00000294728 ARL2BPQ9Y2Y0 163 aa6.61□□□□□ -1.35
VCAM1-201ENST00000294728 PARP14Q460N5 1801 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 FOXN3O00409 490 aaPredicted RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 TTC4O95801 387 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 SHBGP04278 402 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 IVDP26440 423 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 PTPN7P35236 360 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 NF2P35240 595 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 VAMP7P51809 220 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 MFAP3P55082 362 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 NCKAP1LP55160 1127 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 HUNKP57058 714 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 GTF2IP78347 998 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 CLDN10P78369 228 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 C1orf220Q5T0J3 134 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 TCERG1LQ5VWI1 586 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 TTC27Q6P3X3 843 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 PPP1R21Q6ZMI0 780 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 CCDC63Q8NA47 563 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 RDM1Q8NG50 284 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 GIMAP7Q8NHV1 300 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 ZNF398Q8TD17 642 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 FAM212AQ96EL1 285 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 JPH2Q9BR39 696 aaPredicted RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 LARSQ9P2J5 1176 aaKnown RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 KCNG1Q9UIX4 513 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 YDJCA8MPS7 323 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 PHF20L1A8MW92 1017 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 TRAFD1O14545 582 aaPredicted RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 ECEL1O95672 775 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 NDUFB10O96000 172 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 FTLP02792 175 aaPredicted RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 SLC16A2P36021 539 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 CRKP46108 304 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 HSD17B4P51659 736 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 RTP1P59025 263 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 CDR2Q01850 454 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 GCNT1Q02742 428 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 ICA1Q05084 483 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 RRP1BQ14684 758 aaKnown RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 STAT4Q14765 748 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 CEP55Q53EZ4 464 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 LRCH2Q5VUJ6 765 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 USP37Q86T82 979 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 FAM160B2Q86V87 743 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 EXOC3L1Q86VI1 746 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 LRRC34Q8IZ02 419 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 SNF8Q96H20 258 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 WDR18Q9BV38 432 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 GBA2Q9HCG7 927 aaPredicted RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 MTMR7Q9Y216 660 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 MRPL11Q9Y3B7 192 aaKnown RBP6.6□□□□□ -1.35
VCAM1-201ENST00000294728 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
VCAM1-201ENST00000294728 DOCK5Q9H7D0 1870 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 PRPF4O43172 522 aaKnown RBP eCLIP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 PSTPIP1O43586 416 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 FAM155BO75949 473 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 RARAP10276 462 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 PLS3P13797 630 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 NQO1P15559 274 aaKnown RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 RPS12P25398 132 aaKnown RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 PLTPP55058 493 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 RNASE9P60153 205 aaKnown RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 CACNB1Q02641 598 aaPredicted RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 CALCOCO2Q13137 446 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 ACAD10Q6JQN1 1059 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 GJB7Q6PEY0 223 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 ARHGEF18Q6ZSZ5 1173 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 ANKS1BQ7Z6G8 1248 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 ZDHHC14Q8IZN3 488 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 DAW1Q8N136 415 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 XXYLT1Q8NBI6 393 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 DDX1Q92499 740 aaKnown RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 INPP5DQ92835 1189 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 KIFAP3Q92845 792 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 NTPCRQ9BSD7 190 aaKnown RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 TEKT3Q9BXF9 490 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 DPH5Q9H2P9 285 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 SEMA4AQ9H3S1 761 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 GOLPH3Q9H4A6 298 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 AAASQ9NRG9 546 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 FAM198AQ9UFP1 575 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 STARD13Q9Y3M8 1113 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 TBC1D12O60347 775 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 CDH16O75309 829 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 TSHRP16473 764 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 COMTP21964 271 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 NMT1P30419 496 aaKnown RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 GCKP35557 465 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 COPS2P61201 443 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 KCNA1Q09470 495 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 KLF1Q13351 362 aaPredicted RBP6.59□□□□□ -1.35
VCAM1-201ENST00000294728 VSTM1Q6UX27 236 aa6.59□□□□□ -1.35
VCAM1-201ENST00000294728 TRIM72Q6ZMU5 477 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms