RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 DEPTORQ8TB45 409 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 ASAP3Q8TDY4 903 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZNF302Q9NR11 478 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 DIS3Q9Y2L1 958 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 NFS1Q9Y697 457 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 EBAG9O00559 213 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 PHF2O75151 1096 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 SUPT20HL2P0C7V6 817 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 GZMAP12544 262 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 MAPK4P31152 587 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 SKOR1P84550 965 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 SUPT20HL1Q3ZLR7 823 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 BRDTQ58F21 947 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 SCARA3Q6AZY7 606 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 KDM7AQ6ZMT4 941 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 CATSPERGQ6ZRH7 1159 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 RDM1Q8NG50 284 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 C1orf54Q8WWF1 131 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 FAM118BQ9BPY3 351 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 AGO2Q9UKV8 859 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 HMGB1P1B2RPK0 211 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 SHBGP04278 402 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 CFHP08603 1231 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 FDX1P10109 184 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 ATP4AP20648 1035 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 MARK3P27448 753 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 PEX5P50542 639 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 WDR44Q5JSH3 913 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 CD302Q8IX05 232 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 TMC2Q8TDI7 906 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 VTI1AQ96AJ9 217 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 NTPCRQ9BSD7 190 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
NCKIPSD-201ENST00000294129 K7ERI5 159 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■■□□□ 12.2
NCKIPSD-201ENST00000294129 ERLIN2O94905 339 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 RRM1P23921 792 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 RPL21P46778 160 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 XKR3Q5GH77 459 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 TREML2Q5T2D2 321 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 TDRD10Q5VZ19 366 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DUPD1Q68J44 220 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 XRRA1Q6P2D8 792 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 KLRG1Q96E93 195 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 RASAL2Q9UJF2 1139 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 GTF3C4Q9UKN8 822 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 COQ4Q9Y3A0 265 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 POLR2AP24928 1970 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 MAFGO15525 162 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 MAGOHP61326 146 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 SF3A3Q12874 501 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■■■■ 43
NCKIPSD-201ENST00000294129 TRIP13Q15645 432 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 ACAD10Q6JQN1 1059 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 ATG4AQ8WYN0 398 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 HVCN1Q96D96 273 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 FBXL18Q96ME1 805 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 HAPLN2Q9GZV7 340 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 ARHGAP28Q9P2N2 729 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 PNMA2Q9UL42 364 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 E7EVH7 732 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 GJB6O95452 261 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 RARAP10276 462 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 FGFR4P22455 802 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 VPS41P49754 854 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DRP2Q13474 957 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 MTMR3Q13615 1198 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 STXBP2Q15833 593 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 TMEM270Q6UE05 265 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 SENP7Q9BQF6 1050 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 C11orf70Q9BRQ4 267 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DNAJC17Q9NVM6 304 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 RBAKQ9NYW8 714 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 USTQ9Y2C2 406 aa16.92■□□□□ 0.3
NCKIPSD-201ENST00000294129 DOCK1Q14185 1865 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 KIAA0391O15091 583 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 CYP1A2P05177 515 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 SCP2P22307 547 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 GLRA2P23416 452 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 NCAPG2Q86XI2 1143 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 SLC13A5Q86YT5 568 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 SLC7A3Q8WY07 619 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 CYFIP2Q96F07 1278 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 TCHPQ9BT92 498 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 MSTO1Q9BUK6 570 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 C17orf75Q9HAS0 396 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 EXTL3O43909 919 aa16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-201ENST00000294129 SLCO1A2P46721 670 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms