RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCNF-201ENST00000293968 PCDHA3Q9Y5H8 950 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 BNIP1Q12981 228 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 FAM102BQ5T8I3 360 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 PASD1Q8IV76 773 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 SPOCK2Q92563 424 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 RAB3IPQ96QF0 476 aaPredicted RBP15.69■□□□□ 0.1
CCNF-201ENST00000293968 ACCSQ96QU6 501 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 SYT11Q9BT88 431 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 SAYSD1Q9NPB0 183 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 GPRC5CQ9NQ84 441 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 NINJ2Q9NZG7 142 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 ITIH2P19823 946 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 MTM1Q13496 603 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 IZUMO3Q5VZ72 239 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 APOBEC3HQ6NTF7 200 aaKnown RBP15.69■□□□□ 0.1
CCNF-201ENST00000293968 ZNF570Q96NI8 536 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 COA1Q9GZY4 146 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 ANKRD20A2Q5SQ80 823 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ANKRD20A1Q5TYW2 823 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ANKRD20A3Q5VUR7 823 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 CBWD2Q8IUF1 395 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 HAUS1Q96CS2 278 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 KIFC3Q9BVG8 833 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 EBF2Q9HAK2 575 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 KIF9Q9HAQ2 790 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 IFNB1P01574 187 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ATF7P17544 494 aaPredicted RBP15.68■□□□□ 0.1
CCNF-201ENST00000293968 RAD23BP54727 409 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 RIPK1Q13546 671 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 C15orf52Q6ZUT6 534 aaKnown RBP15.68■□□□□ 0.1
CCNF-201ENST00000293968 TMEM117Q9H0C3 514 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ARHGEF10LQ9HCE6 1279 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ADAM22Q9P0K1 906 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 IPO5O00410 1097 aaKnown RBP15.68■□□□□ 0.1
CCNF-201ENST00000293968 CYP11B1P15538 503 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 CHRNB2P17787 502 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 CD58P19256 250 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ALDH3A1P30838 453 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 CEP55Q53EZ4 464 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 HHATQ5VTY9 493 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ANKRD35Q8N283 1001 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 GRK7Q8WTQ7 553 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCNF-201ENST00000293968 NT5C1BQ96P26 610 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 LRRC37BQ96QE4 947 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 TXLNGQ9NUQ3 528 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 R3HDM2Q9Y2K5 976 aaKnown RBP15.68■□□□□ 0.1
CCNF-201ENST00000293968 RALAP11233 206 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 SLC8A3P57103 927 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 MFSD5Q6N075 450 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 PPP1R21Q6ZMI0 780 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 TMEM179Q6ZVK1 233 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 MYLK2Q9H1R3 596 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 SLCO1B3Q9NPD5 702 aa15.68■□□□□ 0.1
CCNF-201ENST00000293968 CLGNO14967 610 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 RFX1P22670 979 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 CA4P22748 312 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 ECE1P42892 770 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 CCDC6Q16204 474 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 LMBRD2Q68DH5 695 aaPredicted RBP15.67■□□□□ 0.1
CCNF-201ENST00000293968 ECHDC2Q86YB7 292 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 BICD1Q96G01 975 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 L3MBTL3Q96JM7 780 aaPredicted RBP15.67■□□□□ 0.1
CCNF-201ENST00000293968 AAASQ9NRG9 546 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 HOMER2Q9NSB8 354 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 WHRNQ9P202 907 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 PI4K2BG5E9Z4 385 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 GOLGA8SH3BPF8 625 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 GOLGA8MH3BSY2 632 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 CDH16O75309 829 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 CETPP11597 493 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 CCNHP51946 323 aaPredicted RBP15.67■□□□□ 0.1
CCNF-201ENST00000293968 STAT2P52630 851 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 FMO1Q01740 532 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 HAUS6Q7Z4H7 955 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 LRRC8CQ8TDW0 803 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 KREMEN1Q96MU8 473 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 RBM15Q96T37 977 aaKnown RBP eCLIP15.67■□□□□ 0.16e-7■■■■□ 23.3
CCNF-201ENST00000293968 TMEM109Q9BVC6 243 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 TRAIPQ9BWF2 469 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 CCDC134Q9H6E4 229 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 TMEM206Q9H813 350 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 GTF3C4Q9UKN8 822 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 NUDCD1Q96RS6 583 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 ZNF148Q9UQR1 794 aa15.67■□□□□ 0.1
CCNF-201ENST00000293968 PSMD10O75832 226 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 P3H1Q32P28 736 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 LMO3Q8TAP4 145 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 FAXDC2Q96IV6 333 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 OSBPL1AQ9BXW6 950 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 WDR11Q9BZH6 1224 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 EHMT1Q9H9B1 1298 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 DMAC2Q9NW81 257 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 DCTN4Q9UJW0 460 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 PIAS1O75925 651 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 SP4Q02446 784 aa15.66■□□□□ 0.1
CCNF-201ENST00000293968 MAGEB18Q96M61 343 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms